RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SMCR8Q8TEV9 937 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-205ENST00000562310 SMARCE1Q969G3 411 aa16.06■□□□□ 0.16
COMMD4-205ENST00000562310 PAGE5Q96GU1 130 aa16.06■□□□□ 0.16
COMMD4-205ENST00000562310 PARK7Q99497 189 aaKnown RBP16.06■□□□□ 0.16
COMMD4-205ENST00000562310 RIT2Q99578 217 aa16.06■□□□□ 0.16
COMMD4-205ENST00000562310 MMTAG2Q9BU76 263 aaKnown RBP16.06■□□□□ 0.16
COMMD4-205ENST00000562310 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
COMMD4-205ENST00000562310 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
COMMD4-205ENST00000562310 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
COMMD4-205ENST00000562310 RBSNQ9H1K0 784 aa16.06■□□□□ 0.16
COMMD4-205ENST00000562310 ZCCHC17Q9NP64 241 aaKnown RBP16.06■□□□□ 0.16
COMMD4-205ENST00000562310 JADE2Q9NQC1 790 aa16.06■□□□□ 0.16
COMMD4-205ENST00000562310 LRRC37A2A6NM11 1700 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 TESPA1A2RU30 521 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-205ENST00000562310 MANSC4A6NHS7 340 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-205ENST00000562310 B4DLN1 442 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 GAS7O60861 476 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 CDC25AP30304 524 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 NLRP12P59046 1061 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 ERVK-9P63128 1117 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 ERVK-24P63145 666 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 SEMA3FQ13275 785 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 PPP2R5CQ13362 524 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 ANO6Q4KMQ2 910 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 TMEM119Q4V9L6 283 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 LRCH2Q5VUJ6 765 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 IWS1Q96ST2 819 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 MPHOSPH6Q99547 160 aaKnown RBP16.05■□□□□ 0.16
COMMD4-205ENST00000562310 ZNF577Q9BSK1 485 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 TEKT3Q9BXF9 490 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 ADD3Q9UEY8 706 aaKnown RBP16.05■□□□□ 0.16
COMMD4-205ENST00000562310 VAV3Q9UKW4 847 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
COMMD4-205ENST00000562310 NR3C2P08235 984 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 ITGB5P18084 799 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 ERCC3P19447 782 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
COMMD4-205ENST00000562310 ZNF157P51786 506 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-205ENST00000562310 AMPD3Q01432 767 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 GRB10Q13322 594 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 UVSSAQ2YD98 709 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 RGMBQ6NW40 437 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 NLRX1Q86UT6 975 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 CYP2W1Q8TAV3 490 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 SPATA20Q8TB22 786 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 GPRASP2Q96D09 838 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 GSDMAQ96QA5 445 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 LRRC27Q9C0I9 530 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 MORF4L1Q9UBU8 362 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 PCDHA5Q9Y5H7 936 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 KIAA1217Q5T5P2 1943 aa16.04■□□□□ 0.16
COMMD4-205ENST00000562310 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 IPO5O00410 1097 aaKnown RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 KIF3CO14782 793 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 MAFGO15525 162 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 PSMD10O75832 226 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 MYCLP12524 364 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 HSPA6P17066 643 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 DEKP35659 375 aaKnown RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 AFMP43652 599 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 SARSP49591 514 aaKnown RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 MRPS9P82933 396 aaKnown RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 DPYDQ12882 1025 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 MTMR1Q13613 665 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
COMMD4-205ENST00000562310 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 SAPCD2Q86UD0 394 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 GPRC5AQ8NFJ5 357 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 NEK9Q8TD19 979 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 TBC1D22BQ9NU19 505 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 KBTBD4Q9NVX7 518 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 DACH1Q9UI36 760 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 TLL2Q9Y6L7 1015 aa16.03■□□□□ 0.16
COMMD4-205ENST00000562310 FOXN1O15353 648 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 SLC10A3P09131 477 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 ARP10275 920 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 CYP2C8P10632 490 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 MUTP22033 750 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 RPA1P27694 616 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 KCTD2Q14681 263 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 GRAMD1CQ8IYS0 662 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 LARP4BQ92615 738 aaKnown RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 ERCC4Q92889 916 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 HHIPL1Q96JK4 782 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 MMP19Q99542 508 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms