RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 SLC39A2Q9NP94 309 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 RNF146Q9NTX7 359 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 ZBTB39O15060 712 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 ITGB5P18084 799 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 MSNP26038 577 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 HSD17B4P51659 736 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 TPM4P67936 248 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 BAATQ14032 418 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 CEP55Q53EZ4 464 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 ZNF658Q5TYW1 1059 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 SLFN12Q8IYM2 578 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 GLIS3Q8NEA6 775 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 SYTL5Q8TDW5 730 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 RAD54LQ92698 747 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 ZNF214Q9UL59 606 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 SYNRGQ9UMZ2 1314 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 CYP3A4P08684 503 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 IREB2P48200 963 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 UBASH3AP57075 661 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 TRAF1Q13077 416 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 CTTNQ14247 550 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 MOXD1Q6UVY6 613 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 RNF207Q6ZRF8 634 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 REPS2Q8NFH8 660 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 DDX12PQ92771 950 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 R3HDMLQ9H3Y0 253 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 TBC1D7Q9P0N9 293 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 OTOFQ9HC10 1997 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 RLFQ13129 1914 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 PARP14Q460N5 1801 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 MRPS9P82933 396 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 TMEM119Q4V9L6 283 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 LRCH2Q5VUJ6 765 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 ENOX1Q8TC92 643 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 NELFBQ8WX92 580 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 ZNF577Q9BSK1 485 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 BCAS3Q9H6U6 928 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
SNRPA1-211ENST00000560433 SORBS3O60504 671 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 TMC6Q7Z403 805 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 ZNF526Q8TF50 670 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 MRFAP1L1Q96HT8 127 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 C12orf42Q96LP6 360 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 RMDN3Q96TC7 470 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 NF2P35240 595 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 LRRC41Q15345 812 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 MCTP2Q6DN12 878 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 MCF2L2Q86YR7 1114 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 EIF2AK1Q9BQI3 630 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 RMND1Q9NWS8 449 aa12.17□□□□□ -0.46
SNRPA1-211ENST00000560433 GAS7O60861 476 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 RHOBTB3O94955 611 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 PLA2G4BP0C869 781 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 ERCC3P19447 782 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 PAK1Q13153 545 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 PGM5Q15124 567 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 ANKRD13AQ8IZ07 590 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 KIAA0895Q8NCT3 520 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 OPTNQ96CV9 577 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 FAM20AQ96MK3 541 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 PAGR1Q9BTK6 254 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 INTS13Q9NVM9 706 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 IPO5O00410 1097 aaKnown RBP12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 TBX3O15119 743 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 PSMD10O75832 226 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 ZNF18P17022 549 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 AMPD3Q01432 767 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 FAM43AQ8N2R8 423 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 DYDC2Q96IM9 177 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 WDR90Q96KV7 1748 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 MXRA8Q9BRK3 442 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 FGFBP2Q9BYJ0 223 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms