RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HNRNPH1P31943 449 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 LSP1P33241 339 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 C1orf131Q8NDD1 294 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 PNMA5Q96PV4 448 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 ANKRD2Q9GZV1 360 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 EPN3Q9H201 632 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 NLRC4Q9NPP4 1024 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 SEC63Q9UGP8 760 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
VIPAS39-211ENST00000557658 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 NR1D1P20393 614 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 ITPK1Q13572 414 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 NAB2Q15742 525 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 CALCRLQ16602 461 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 CNPY4Q8N129 248 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 KRT12Q99456 494 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 RAB34Q9BZG1 259 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 MEFVO15553 781 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 KCNMA1Q12791 1236 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 RAD54LQ92698 747 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 PAGR1Q9BTK6 254 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 GEMIN8Q9NWZ8 242 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 COL4A3BPQ9Y5P4 624 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 CAPN7Q9Y6W3 813 aa13.03□□□□□ -0.32
VIPAS39-211ENST00000557658 ZSCAN5CA6NGD5 496 aaPredicted RBP13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 FTCDO95954 541 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 ERCC3P19447 782 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 DNA2P51530 1060 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 TNNC1P63316 161 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 CDC37Q16543 378 aaPredicted RBP13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 MYOCDQ8IZQ8 938 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 CASKIN2Q8WXE0 1202 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 PIK3R5Q8WYR1 880 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 ATP6V1G3Q96LB4 118 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 MTMR9Q96QG7 549 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 BIN2Q9UBW5 565 aaPredicted RBP13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 PCDHGC5Q9Y5F6 944 aa13.02□□□□□ -0.32
VIPAS39-211ENST00000557658 H0YHG0 523 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 PPP1R37O75864 691 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 FSBPO95073 299 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 MNAT1P51948 309 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 FKBP3Q00688 224 aaKnown RBP13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 GUCY1A3Q02108 690 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 NAA35Q5VZE5 725 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 YTHDF3Q7Z739 585 aaKnown RBP13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 SH3RF3Q8TEJ3 882 aaPredicted RBP13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 LSM14BQ9BX40 385 aaKnown RBP13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
VIPAS39-211ENST00000557658 SRRM3A6NNA2 597 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 TLR2O60603 784 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 LRRC41Q15345 812 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 PTGISQ16647 500 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 KRT79Q5XKE5 535 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 CCDC91Q7Z6B0 441 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 SLC44A5Q8NCS7 719 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 TAF4BQ92750 862 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 DDX12PQ92771 950 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 NCAPGQ9BPX3 1015 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 NAV1Q8NEY1 1877 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 ESYT2A0FGR8 921 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 GOLGA6L10A6NI86 522 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 TRAF5O00463 557 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 NOL4O94818 638 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 BAG3O95817 575 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 RASA1P20936 1047 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 KLRC1P26715 233 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 HSPA9P38646 679 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 MDH1P40925 334 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 EHHADHQ08426 723 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 PDIA5Q14554 519 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 KCNV1Q6PIU1 500 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 MAATS1Q7Z4T9 603 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 ARFGAP2Q8N6H7 521 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 ZNF473Q8WTR7 871 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
VIPAS39-211ENST00000557658 COL14A1Q05707 1796 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms