RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 OSBPL7Q9BZF2 842 aa14.88□□□□□ -0.03
PSEN1-220ENST00000557037 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
PSEN1-220ENST00000557037 ARPP21Q9UBL0 812 aaPredicted RBP14.88□□□□□ -0.03
PSEN1-220ENST00000557037 PRR12Q9ULL5 1215 aa14.88□□□□□ -0.03
PSEN1-220ENST00000557037 LINC00271P0C7V0 271 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 SP100P23497 879 aaPredicted RBP14.87□□□□□ -0.03
PSEN1-220ENST00000557037 NRIP1P48552 1158 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 RASGRP2Q7LDG7 609 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 RBM23Q86U06 439 aaKnown RBP14.87□□□□□ -0.03
PSEN1-220ENST00000557037 KCNG4Q8TDN1 519 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 MYO10Q9HD67 2058 aa14.87□□□□□ -0.03
PSEN1-220ENST00000557037 GLP2RO95838 553 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 MMP1P03956 469 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 ZNF286BP0CG31 522 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 CASTP20810 708 aaKnown RBP14.86□□□□□ -0.03
PSEN1-220ENST00000557037 HIC1Q14526 733 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 PUM1Q14671 1186 aaKnown RBP eCLIP14.86□□□□□ -0.03
PSEN1-220ENST00000557037 MFSD10Q14728 455 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 ZNF444Q8N0Y2 327 aaPredicted RBP14.86□□□□□ -0.03
PSEN1-220ENST00000557037 PPP2R3CQ969Q6 453 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 IL1RAPL2Q9NP60 686 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 DNAH14Q0VDD8 3507 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 OTOGLQ3ZCN5 2332 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 CFAP47Q6ZTR5 3102 aa14.86□□□□□ -0.03
PSEN1-220ENST00000557037 LOC102724159A0A0B4J2E5 919 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 GH1P01241 217 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 ICAM1P05362 532 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 DNAJB1P25685 340 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 RARSP54136 660 aaKnown RBP14.85□□□□□ -0.03
PSEN1-220ENST00000557037 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
PSEN1-220ENST00000557037 ARHGAP1Q07960 439 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 PWP2Q15269 919 aaKnown RBP14.85□□□□□ -0.03
PSEN1-220ENST00000557037 LY6KQ17RY6 165 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 KIAA0753Q2KHM9 967 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 DHX37Q8IY37 1157 aaKnown RBP14.85□□□□□ -0.03
PSEN1-220ENST00000557037 KREMEN2Q8NCW0 462 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 GMCL1Q96IK5 515 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 SYNPO2Q9UMS6 1093 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 PLAGL2Q9UPG8 496 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 MTMR7Q9Y216 660 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 PCDHGC5Q9Y5F6 944 aa14.85□□□□□ -0.03
PSEN1-220ENST00000557037 CTSHP09668 335 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 TRIM27P14373 513 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 EDNRBP24530 442 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 SBK1Q52WX2 424 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 ASTLQ6HA08 431 aaPredicted RBP14.84□□□□□ -0.03
PSEN1-220ENST00000557037 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 SEPT14Q6ZU15 432 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 PUS7LQ9H0K6 701 aaKnown RBP14.84□□□□□ -0.03
PSEN1-220ENST00000557037 SMOC2Q9H3U7 446 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 PAG1Q9NWQ8 432 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 RWDD3Q9Y3V2 267 aa14.84□□□□□ -0.03
PSEN1-220ENST00000557037 FASNP49327 2511 aaKnown RBP14.84□□□□□ -0.03
PSEN1-220ENST00000557037 ATF7P17544 494 aaPredicted RBP14.83□□□□□ -0.04
PSEN1-220ENST00000557037 DGKDQ16760 1214 aa14.83□□□□□ -0.04
PSEN1-220ENST00000557037 RCSD1Q6JBY9 416 aa14.83□□□□□ -0.04
PSEN1-220ENST00000557037 RNF207Q6ZRF8 634 aa14.83□□□□□ -0.04
PSEN1-220ENST00000557037 MPHOSPH6Q99547 160 aaKnown RBP14.83□□□□□ -0.04
PSEN1-220ENST00000557037 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.83□□□□□ -0.04
PSEN1-220ENST00000557037 RALYQ9UKM9 306 aaKnown RBP14.83□□□□□ -0.04
PSEN1-220ENST00000557037 ADGRA3Q8IWK6 1321 aa14.83□□□□□ -0.04
PSEN1-220ENST00000557037 GPR179Q6PRD1 2367 aa14.83□□□□□ -0.04
PSEN1-220ENST00000557037 ZFHX4Q86UP3 3567 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 PLA2G6O60733 806 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 BRD1O95696 1058 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 CT47B1P0C2W7 299 aaPredicted RBP14.82□□□□□ -0.04
PSEN1-220ENST00000557037 SLC16A2P36021 539 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 RPS6P62753 249 aaKnown RBP14.82□□□□□ -0.04
PSEN1-220ENST00000557037 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
PSEN1-220ENST00000557037 ST3GAL2Q16842 350 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 SERINC5Q86VE9 423 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 SUSD6Q92537 303 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
PSEN1-220ENST00000557037 CLP1Q92989 425 aaKnown RBP14.82□□□□□ -0.04
PSEN1-220ENST00000557037 BOLA2Q9H3K6 86 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 MFSD1Q9H3U5 465 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 FAM208BQ5VWN6 2430 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 FRYLO94915 3013 aa14.82□□□□□ -0.04
PSEN1-220ENST00000557037 GSG1L2A8MUP6 293 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 HAS3O00219 553 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 PER2O15055 1255 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 ITGB1P05556 798 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 TSPY3P0CV98 308 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 TSPY8P0CW00 308 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 ARP10275 920 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 UBE3CQ15386 1083 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 SPPL3Q8TCT6 385 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 CLEC4DQ8WXI8 215 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 KATNAL1Q9BW62 490 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 APOL5Q9BWW9 433 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 RANBP17Q9H2T7 1088 aaKnown RBP14.81□□□□□ -0.04
PSEN1-220ENST00000557037 TLE6Q9H808 572 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
PSEN1-220ENST00000557037 IPO8O15397 1037 aaKnown RBP14.8□□□□□ -0.04
PSEN1-220ENST00000557037 F2P00734 622 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms