RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PCDHA2Q9Y5H9 948 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 CCDC194A0A1B0GVG4 234 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 SHTN1A0MZ66 631 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 FAM47E-STBD1D6RA91 191 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 K7ESF4 209 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 GABRDO14764 452 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 TBC1D8O95759 1140 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 MAP4K4O95819 1239 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-209ENST00000553280 LSSP48449 732 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 TBX4P57082 545 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 OCRLQ01968 901 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 FAPQ12884 760 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 MBLAC2Q68D91 279 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 PASD1Q8IV76 773 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 IPPKQ9H8X2 491 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
SCFD1-209ENST00000553280 TIMM13Q9Y5L4 95 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-209ENST00000553280 ARID4BQ4LE39 1312 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-209ENST00000553280 E2F8A0AVK6 867 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 CCDC66A2RUB6 948 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 KIF3BO15066 747 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 PRC1O43663 620 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 MYO1BO43795 1136 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
SCFD1-209ENST00000553280 AFMP43652 599 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 DNM2P50570 870 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 ST5P78524 1137 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 LSAMPQ13449 338 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 LRRC41Q15345 812 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 ARHGAP44Q17R89 818 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 IQSEC1Q6DN90 963 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 TMPRSS7Q7RTY8 843 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 CPNE8Q86YQ8 564 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 CREG2Q8IUH2 290 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 CHPFQ8IZ52 775 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 PANK1Q8TE04 598 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 GPR101Q96P66 508 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-209ENST00000553280 CAMKK2Q96RR4 588 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 SMAD5Q99717 465 aaKnown RBP6.74□□□□□ -1.33
SCFD1-209ENST00000553280 CDADC1Q9BWV3 514 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 PCGF6Q9BYE7 350 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 EMC7Q9NPA0 242 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 THG1LQ9NWX6 298 aaKnown RBP6.74□□□□□ -1.33
SCFD1-209ENST00000553280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCFD1-209ENST00000553280 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 GABBR1Q9UBS5 961 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 DUSP13Q9UII6 198 aa6.74□□□□□ -1.33
SCFD1-209ENST00000553280 PTPDC1A2A3K4 754 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 C7orf72A4D263 438 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ZNF503-AS2A6NEH8 195 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 PRKD3O94806 890 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 FBXO21O94952 628 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ESR1P03372 595 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 GRK2P25098 689 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 GRK3P35626 688 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 GTF2A2P52657 109 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 LACTBP83111 547 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ZNF124Q15973 351 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 MLANAQ16655 118 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 CYP2R1Q6VVX0 501 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 C11orf74Q86VG3 221 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 WDR75Q8IWA0 830 aaKnown RBP6.73□□□□□ -1.33
SCFD1-209ENST00000553280 CHTF18Q8WVB6 975 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 LIN37Q96GY3 246 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-209ENST00000553280 KIRREL1Q96J84 757 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ALPK1Q96QP1 1244 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 CDH19Q9H159 772 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ZIM2Q9NZV7 527 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ZNF281Q9Y2X9 895 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 TNKSO95271 1327 aa6.73□□□□□ -1.33
SCFD1-209ENST00000553280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 TMEM82A0PJX8 343 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 LRRC10BA6NIK2 292 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 FKTNO75072 461 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 ULK1O75385 1050 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 FARP2O94887 1054 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 GDNFP39905 211 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 BCL6P41182 706 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 KPNA1P52294 538 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 RPL11P62913 178 aaKnown RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 TEKQ02763 1124 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 PIN1Q13526 163 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 RALGPS1Q5JS13 557 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 OTOP1Q7RTM1 612 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 ZBTB46Q86UZ6 589 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 C2orf69Q8N8R5 385 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 TMEM52Q8NDY8 209 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 HOOK2Q96ED9 719 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 SCYL1Q96KG9 808 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 AASDHPPTQ9NRN7 309 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 CATSPERZQ9NTU4 200 aa6.72□□□□□ -1.33
SCFD1-209ENST00000553280 PPARGC1AQ9UBK2 798 aaKnown RBP6.72□□□□□ -1.33
SCFD1-209ENST00000553280 CBLCQ9ULV8 474 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms