RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 RRAGBQ5VZM2 374 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 CATSPERGQ6ZRH7 1159 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-216ENST00000552800 SPICE1Q8N0Z3 855 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 LRRC27Q9C0I9 530 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 TTC12Q9H892 705 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-216ENST00000552800 RMND1Q9NWS8 449 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 HOXC10Q9NYD6 342 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 GGA3Q9NZ52 723 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 RNF181Q9P0P0 153 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 WDR90Q96KV7 1748 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 SPDYE3A6NKU9 549 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 PPP1R3GB7ZBB8 358 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 GOLGA6L19H0YKK7 550 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 VWA5AO00534 786 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 IRF6O14896 467 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 GPR37O15354 613 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 KLRC4O43908 158 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 RGS20O76081 388 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 PPATQ06203 517 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 EHHADHQ08426 723 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 SPP2Q13103 211 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 GRB10Q13322 594 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 ZRSR1Q15695 479 aaKnown RBP11.05□□□□□ -0.64
TMEM116-216ENST00000552800 UBE2SQ16763 222 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 TMEM266Q2M3C6 531 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 ZNF658Q5TYW1 1059 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-216ENST00000552800 CABP7Q86V35 215 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 DHX58Q96C10 678 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 DCPSQ96C86 337 aaKnown RBP11.05□□□□□ -0.64
TMEM116-216ENST00000552800 MED15Q96RN5 788 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 NT5C3AQ9H0P0 336 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 EHMT1Q9H9B1 1298 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 NPDC1Q9NQX5 325 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-216ENST00000552800 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 LRWD1Q9UFC0 647 aa11.05□□□□□ -0.64
TMEM116-216ENST00000552800 PTPRFP10586 1907 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 BECN2A8MW95 431 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 POTECB2RU33 542 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 MAFGO15525 162 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 PPP1R12BO60237 982 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-216ENST00000552800 RPA1P27694 616 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 TECP42680 631 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 ZNF75DP51815 510 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 MYL5Q02045 173 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 PPP2R5CQ13362 524 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 PDILTQ8N807 584 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 GIMAP8Q8ND71 665 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-216ENST00000552800 LRRC15Q8TF66 581 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 SLC5A5Q92911 643 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 PNMA5Q96PV4 448 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 WRNIP1Q96S55 665 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-216ENST00000552800 FBXO28Q9NVF7 368 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 ZHX2Q9Y6X8 837 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 KDM3AQ9Y4C1 1321 aa11.04□□□□□ -0.64
TMEM116-216ENST00000552800 IQCA1LA6NCM1 817 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 FAM86B1E9PN63 330 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 ZBED4O75132 1171 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 PSMD10O75832 226 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 FAM86B2P0C5J1 330 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 STAT6P42226 847 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 TXKP42681 527 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 PSMD2Q13200 908 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 KARSQ15046 597 aaKnown RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 CEP55Q53EZ4 464 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 KRT79Q5XKE5 535 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 KRT26Q7Z3Y9 468 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 ERCC4Q92889 916 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 ZKSCAN4Q969J2 545 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 RIT2Q99578 217 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 HSD17B14Q9BPX1 270 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 TRIM9Q9C026 710 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 IMPACTQ9P2X3 320 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 ZNF214Q9UL59 606 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-216ENST00000552800 SNCAIPQ9Y6H5 919 aa11.03□□□□□ -0.64
TMEM116-216ENST00000552800 MSH4O15457 936 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 RPN1P04843 607 aaKnown RBP11.02□□□□□ -0.65
TMEM116-216ENST00000552800 PLCG1P19174 1290 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 CDC25AP30304 524 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 EPHX2P34913 555 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 TPM4P67936 248 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 SETQ01105 290 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-216ENST00000552800 IKQ13123 557 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-216ENST00000552800 MTMR2Q13614 643 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 SPATA1Q5VX52 437 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 PCNX4Q63HM2 1172 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms