RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	MRVI1	Q9Y6F6	885 aa		12.86	□□□□□ -0.35
RAB5B-208	ENST00000550283	TRIM43B	A6NCK2	446 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	FAM205C	A6NFA0	338 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283		A6NJR5	290 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	SPATA31C2	B4DYI2	1134 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	CPLX1	O14810	134 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	EVI5	O60447	810 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	GGPS1	O95749	300 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	MMP3	P08254	477 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	MYL3	P08590	195 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	AR	P10275	920 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	CAPN2	P17655	700 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	CDK7	P50613	346 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	PURA	Q00577	322 aa	Known RBP	12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	EARS2	Q5JPH6	523 aa	Known RBP	12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	MYSM1	Q5VVJ2	828 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	CCDC83	Q8IWF9	413 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	KAT2B	Q92831	832 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283		Q9Y3F1	56 aa		12.85	□□□□□ -0.35
RAB5B-208	ENST00000550283	MOXD2P	A6NHM9	499 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	FAM86B1	E9PN63	330 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	hCG_1984214	I3L0E3	225 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	DEXI	O95424	95 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	GH1	P01241	217 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	FAM86B2	P0C5J1	330 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	ZNF286B	P0CG31	522 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	KCNA2	P16389	499 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	ICAM3	P32942	547 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	SREBF1	P36956	1147 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	MRPL12	P52815	198 aa	Known RBP	12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	HIC1	Q14526	733 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	ANKRD1	Q15327	319 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	CELF3	Q5SZQ8	465 aa	Known RBP	12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	ZNF713	Q8N859	430 aa	Predicted RBP	12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	SLC43A3	Q8NBI5	491 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	STARD7	Q9NQZ5	370 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	PDLIM7	Q9NR12	457 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	ORC3	Q9UBD5	711 aa	Predicted RBP	12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	LIMCH1	Q9UPQ0	1083 aa		12.84	□□□□□ -0.35
RAB5B-208	ENST00000550283	IGLV3-22	A0A075B6J6	115 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	SPDYE3	A6NKU9	549 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283		B4DLN1	442 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	PQBP1	O60828	265 aa	Known RBP	12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	ARHGAP4	P98171	946 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	AKAP17A	Q02040	695 aa	Known RBP	12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	FAAP100	Q0VG06	881 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	CYFIP1	Q7L576	1253 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	GJA10	Q969M2	543 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	CTAGE1	Q96RT6	745 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	MPHOSPH6	Q99547	160 aa	Known RBP	12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	PHF20	Q9BVI0	1012 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	TRPV6	Q9H1D0	765 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	PRO3102	Q9H379	93 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	STK36	Q9NRP7	1315 aa		12.83	□□□□□ -0.36
RAB5B-208	ENST00000550283	ARVCF	O00192	962 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	WNT7A	O00755	349 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	NKRF	O15226	690 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	FIBP	O43427	364 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	HOXD8	P13378	290 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	NLRP5	P59047	1200 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	SP4	Q02446	784 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	ITGB3BP	Q13352	177 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	ITGA7	Q13683	1181 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	NBPF20	Q3BBV1	942 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	C1orf53	Q5VUE5	145 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	TRIM50	Q86XT4	487 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	FAM126B	Q8IXS8	530 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	DHX37	Q8IY37	1157 aa	Known RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	TRIM22	Q8IYM9	498 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	REXO1	Q8N1G1	1221 aa	Known RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	PCSK9	Q8NBP7	692 aa	Known RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	EMID1	Q96A84	441 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	LENG9	Q96B70	501 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	GLT1D1	Q96MS3	346 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	MXRA8	Q9BRK3	442 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	ALG1	Q9BT22	464 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	SPC25	Q9HBM1	224 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	C6orf50	Q9HD87	102 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	JADE2	Q9NQC1	790 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	SH3GLB2	Q9NR46	395 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	COLQ	Q9Y215	455 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	LTBP2	Q14767	1821 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	ELP1	O95163	1332 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	UMODL1	Q5DID0	1318 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	MYH7B	A7E2Y1	1941 aa		12.82	□□□□□ -0.36
RAB5B-208	ENST00000550283	SCN10A	Q9Y5Y9	1956 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283		A0A0U1RQG5	324 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	MEIS1	O00470	390 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	B4GALT4	O60513	344 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	CD4	P01730	458 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	MAGEA10	P43363	369 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	GUCY1B3	Q02153	619 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	NR5A1	Q13285	461 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	AP3B2	Q13367	1082 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	RABEP1	Q15276	862 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	XRRA1	Q6P2D8	792 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	CHRDL2	Q6WN34	429 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	ANKRD33	Q7Z3H0	272 aa		12.81	□□□□□ -0.36
RAB5B-208	ENST00000550283	BLID	Q8IZY5	108 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms