RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 TRIM50Q86XT4 487 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 SMARCC2Q8TAQ2 1214 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 CYP2W1Q8TAV3 490 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 RASGRP4Q8TDF6 673 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 DHX38Q92620 1227 aaKnown RBP14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 AIFM3Q96NN9 605 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 INPP4AQ96PE3 977 aaPredicted RBP14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 MTG1Q9BT17 334 aaPredicted RBP14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 GRXCR1A8MXD5 290 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 PIK3CDO00329 1044 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 ITGB5P18084 799 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 PDIA3P30101 505 aaKnown RBP14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 CPT1AP50416 773 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 SP4Q02446 784 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 CELF3Q5SZQ8 465 aaKnown RBP14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 GDF6Q6KF10 455 aaPredicted RBP14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 RUFY3Q7L099 469 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 OSBPL7Q9BZF2 842 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 PSTPIP2Q9H939 334 aa14.71□□□□□ -0.05
AP000439.2-201ENST00000542064 CHD9Q3L8U1 2897 aa14.71□□□□□ -0.06
AP000439.2-201ENST00000542064 A0A1W2PPC1 479 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 NKRFO15226 690 aaKnown RBP eCLIP14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 EDIL3O43854 480 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 NAPAP54920 295 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 FPGSQ05932 587 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 STK3Q13188 491 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 ALG1Q9BT22 464 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 POLR3EQ9NVU0 708 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 RBM28Q9NW13 759 aaKnown RBP14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 CXXC1Q9P0U4 656 aaPredicted RBP14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 PCDHA6Q9UN73 950 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 PCDHA8Q9Y5H6 950 aa14.7□□□□□ -0.06
AP000439.2-201ENST00000542064 SPATA31C2B4DYI2 1134 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 HOXD8P13378 290 aaPredicted RBP14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 FGD1P98174 961 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 GPNMBQ14956 572 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 LRIT3Q3SXY7 679 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 TMEM240Q5SV17 173 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 MFSD5Q6N075 450 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 SYNE3Q6ZMZ3 975 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 CYFIP1Q7L576 1253 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 DHX37Q8IY37 1157 aaKnown RBP14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 EMID1Q96A84 441 aaPredicted RBP14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 ZBTB10Q96DT7 871 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 FAM161BQ96MY7 647 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 SPATA33Q96N06 139 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 C16orf70Q9BSU1 422 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 HDAC6Q9UBN7 1215 aa14.69□□□□□ -0.06
AP000439.2-201ENST00000542064 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 HAS3O00219 553 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 ZEB2O60315 1214 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 CABYRO75952 493 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 HMGB1P09429 215 aaKnown RBP14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 KCNA2P16389 499 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 CLK2P49760 499 aaKnown RBP14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 PSEN2P49810 448 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 EVCP57679 992 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 ST3GAL1Q11201 340 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 PFKFB3Q16875 520 aaPredicted RBP14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 JAKMIP3Q5VZ66 844 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 PPTC7Q8NI37 304 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 MPHOSPH6Q99547 160 aaKnown RBP14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 ANO3Q9BYT9 981 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 MAF1Q9H063 256 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 RIC8AQ9NPQ8 531 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 BARHL2Q9NY43 387 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 MAP3K20Q9NYL2 800 aaKnown RBP14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 UBIAD1Q9Y5Z9 338 aa14.68□□□□□ -0.06
AP000439.2-201ENST00000542064 MROH7Q68CQ1 1323 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 CHD7Q9P2D1 2997 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 SMCO2A6NFE2 343 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 F2P00734 622 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 ARP10275 920 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 SCG2P13521 617 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 ICAM3P32942 547 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 PBX2P40425 430 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 MFSD10Q14728 455 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 KIAA0753Q2KHM9 967 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 C8orf34Q49A92 452 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 ZNF365Q70YC5 407 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 FBXL16Q8N461 479 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 SAMD3Q8N6K7 520 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 GPR20Q99678 358 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 SLC26A6Q9BXS9 759 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 VPS54Q9P1Q0 977 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 TPCN1Q9ULQ1 816 aa14.67□□□□□ -0.06
AP000439.2-201ENST00000542064 B4DLN1 442 aa14.66□□□□□ -0.06
AP000439.2-201ENST00000542064 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
AP000439.2-201ENST00000542064 LGALS2P05162 132 aa14.66□□□□□ -0.06
AP000439.2-201ENST00000542064 ADCY7P51828 1080 aa14.66□□□□□ -0.06
AP000439.2-201ENST00000542064 MRPL12P52815 198 aaKnown RBP14.66□□□□□ -0.06
AP000439.2-201ENST00000542064 ITGB3BPQ13352 177 aaPredicted RBP14.66□□□□□ -0.06
AP000439.2-201ENST00000542064 NPY5RQ15761 445 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms