RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 C5orf67F2Z3F1 127 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 PER2O15055 1255 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 BRD1O95696 1058 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 RB1P06400 928 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 RSPH10BP0C881 870 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 MCCP23508 829 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 PSEN2P49810 448 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 ASTLQ6HA08 431 aaPredicted RBP11.59□□□□□ -0.55
CHFR-220ENST00000541817 DCLK2Q8N568 766 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 EFHBQ8N7U6 833 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 STAG1Q8WVM7 1258 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 IL17RAQ96F46 866 aa11.59□□□□□ -0.55
CHFR-220ENST00000541817 ADD3Q9UEY8 706 aaKnown RBP11.59□□□□□ -0.55
CHFR-220ENST00000541817 NCOR2Q9Y618 2525 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHFR-220ENST00000541817 PI15O43692 258 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 SORBS3O60504 671 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 MMP1P03956 469 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 CTSHP09668 335 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 ZNF286BP0CG31 522 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 ATP8B2P98198 1209 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 SLFN5Q08AF3 891 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 MFSD10Q14728 455 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 TTF1Q15361 905 aaPredicted RBP11.58□□□□□ -0.56
CHFR-220ENST00000541817 TMED8Q6PL24 325 aaPredicted RBP11.58□□□□□ -0.56
CHFR-220ENST00000541817 SSH3Q8TE77 659 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 MKL1Q969V6 931 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 MTMR4Q9NYA4 1195 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 CDH22Q9UJ99 828 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 PRR12Q9ULL5 1215 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 PLAGL2Q9UPG8 496 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 FRYLO94915 3013 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
CHFR-220ENST00000541817 FDX1P10109 184 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 ADD2P35612 726 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 RSPO4Q2I0M5 234 aaPredicted RBP11.57□□□□□ -0.56
CHFR-220ENST00000541817 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 FAM160B2Q86V87 743 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 FLCNQ8NFG4 579 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 SEPT8Q92599 483 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 MFSD1Q9H3U5 465 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 IL1RAPL2Q9NP60 686 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 R4GN57 208 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 ZNF292O60281 2723 aa11.57□□□□□ -0.56
CHFR-220ENST00000541817 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 PPFIA3O75145 1194 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 TTLL1O95922 423 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 ITGB1P05556 798 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 HOXB3P14651 431 aaPredicted RBP11.56□□□□□ -0.56
CHFR-220ENST00000541817 CASTP20810 708 aaKnown RBP11.56□□□□□ -0.56
CHFR-220ENST00000541817 SLC16A2P36021 539 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 SLC1A4P43007 532 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 ARHGAP1Q07960 439 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 ANGPT1Q15389 498 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
CHFR-220ENST00000541817 DHX37Q8IY37 1157 aaKnown RBP11.56□□□□□ -0.56
CHFR-220ENST00000541817 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
CHFR-220ENST00000541817 SPPL3Q8TCT6 385 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 DLL3Q9NYJ7 618 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 EMSYQ7Z589 1322 aa11.56□□□□□ -0.56
CHFR-220ENST00000541817 GH1P01241 217 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 LMNAP02545 664 aaKnown RBP11.55□□□□□ -0.56
CHFR-220ENST00000541817 ASGR2P07307 311 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 BTG3Q14201 252 aaPredicted RBP11.55□□□□□ -0.56
CHFR-220ENST00000541817 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 CCDC62Q6P9F0 684 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 POF1BQ8WVV4 589 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 SUSD6Q92537 303 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
CHFR-220ENST00000541817 TLE6Q9H808 572 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
CHFR-220ENST00000541817 TPRP12270 2363 aaKnown RBP11.55□□□□□ -0.56
CHFR-220ENST00000541817 ADGRA3Q8IWK6 1321 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 PLXNA4Q9HCM2 1894 aa11.55□□□□□ -0.56
CHFR-220ENST00000541817 ATF7P17544 494 aaPredicted RBP11.54□□□□□ -0.56
CHFR-220ENST00000541817 DGKDQ16760 1214 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
CHFR-220ENST00000541817 CWF19L1Q69YN2 538 aaKnown RBP11.54□□□□□ -0.56
CHFR-220ENST00000541817 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 CYP2W1Q8TAV3 490 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
CHFR-220ENST00000541817 PPP2R3CQ969Q6 453 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 CHAMP1Q96JM3 812 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 ANP32EQ9BTT0 268 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
CHFR-220ENST00000541817 SORCS3Q9UPU3 1222 aa11.54□□□□□ -0.56
CHFR-220ENST00000541817 MRPL42Q9Y6G3 142 aaKnown RBP11.54□□□□□ -0.56
CHFR-220ENST00000541817 HAS3O00219 553 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 ICAM1P05362 532 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms