RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 CPLX3Q8WVH0 158 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 SGIP1Q9BQI5 828 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 EHMT1Q9H9B1 1298 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 BMP2KQ9NSY1 1161 aaPredicted RBP23■■□□□ 1.27
SMPDL3A-203ENST00000539041 MSH4O15457 936 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 PLA2G4BP0C869 781 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 CASP14P31944 242 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 R3HDM1Q15032 1099 aaKnown RBP22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 NCAPH2Q6IBW4 605 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 REXO1L1PQ8IX06 675 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 KIF18AQ8NI77 898 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 SEMA6BQ9H3T3 888 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 FBXO28Q9NVF7 368 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 PPP2R2CQ9Y2T4 447 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 FZD9O00144 591 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 COASYQ13057 564 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 MB21D1Q8N884 522 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 TBC1D5Q92609 795 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 CNOT6LQ96LI5 555 aaKnown RBP22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 GJA3Q9Y6H8 435 aa22.99■■□□□ 1.27
SMPDL3A-203ENST00000539041 A0A1W2PQC6 194 aa22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 WDR46O15213 610 aaKnown RBP22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 SSBP05455 408 aaKnown RBP eCLIP22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 PTGER2P43116 358 aa22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 SAMD7Q7Z3H4 446 aa22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 LDHDQ86WU2 507 aa22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 ZNF507Q8TCN5 953 aa22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 CNOT7Q9UIV1 285 aaKnown RBP22.98■■□□□ 1.27
SMPDL3A-203ENST00000539041 PHIPQ8WWQ0 1821 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 IGLV3-22A0A075B6J6 115 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 DNM2P50570 870 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 FXR1P51114 621 aaKnown RBP eCLIP22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 SAMD1Q6SPF0 538 aaPredicted RBP22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 GPBP1Q86WP2 473 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 TUBGCP2Q9BSJ2 902 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 PANK4Q9NVE7 773 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 HACL1Q9UJ83 578 aa22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 COL11A1P12107 1806 aaPredicted RBP22.97■■□□□ 1.27
SMPDL3A-203ENST00000539041 GOLGA6L9A6NEM1 432 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 CTNND1O60716 968 aaKnown RBP22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 FECHP22830 423 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 RPA1P27694 616 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 INPP5BP32019 993 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 TBC1D10BQ4KMP7 808 aaPredicted RBP22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 CCDC65Q8IXS2 484 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 LPAR1Q92633 364 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 VAV3Q9UKW4 847 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 MYH11P35749 1972 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTEFA5A3E0 1075 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTEIP0CG38 1075 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 PRKCSHP14314 528 aaPredicted RBP22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 PRELPP51888 382 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 LRRC63Q05C16 580 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 KIF4BQ2VIQ3 1234 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 FOXR2Q6PJQ5 311 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTEGQ6S5H5 508 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTEEQ6S8J3 1075 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 CATSPER3Q86XQ3 398 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 KIAA1683Q9H0B3 1180 aa22.96■■□□□ 1.27
SMPDL3A-203ENST00000539041 PES1O00541 588 aaKnown RBP22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 FGFR1OPO95684 399 aaKnown RBP22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 ICAM1P05362 532 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 CYP11B2P19099 503 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 MTIF2P46199 727 aaKnown RBP22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 FAM26FQ5R3K3 315 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 TOGARAM2Q6ZUX3 1019 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 CYP2W1Q8TAV3 490 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 SLF1Q9BQI6 1058 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 DEFB129Q9H1M3 183 aa22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 ASTN2O75129 1339 aaPredicted RBP22.95■■□□□ 1.26
SMPDL3A-203ENST00000539041 SPATA31C1P0DKV0 1188 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 SLC12A3P55017 1021 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 SYT10Q6XYQ8 523 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 MYOCDQ8IZQ8 938 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 TSG101Q99816 390 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 WDR18Q9BV38 432 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 CCPG1Q9ULG6 757 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 SBF1O95248 1867 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 PITPNM2Q9BZ72 1349 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 SOWAHDA6NJG2 315 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 CTIFO43310 598 aaKnown RBP22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 ETF1P62495 437 aaKnown RBP22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 PRPF38AQ8NAV1 312 aaKnown RBP22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 POLR3CQ9BUI4 534 aaPredicted RBP22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 ABHD10Q9NUJ1 306 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 DNM3Q9UQ16 869 aa22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 POLR2AP24928 1970 aaKnown RBP22.94■■□□□ 1.26
SMPDL3A-203ENST00000539041 B4DLN1 442 aa22.93■■□□□ 1.26
SMPDL3A-203ENST00000539041 ZNF536O15090 1300 aa22.93■■□□□ 1.26
SMPDL3A-203ENST00000539041 PHLPP2Q6ZVD8 1323 aa22.93■■□□□ 1.26
SMPDL3A-203ENST00000539041 RLFQ13129 1914 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 KRT18P05783 430 aaKnown RBP22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 MTF1Q14872 753 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 LRRC41Q15345 812 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 DCAF15Q66K64 600 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 TRIM65Q6PJ69 517 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 RAD9BQ6WBX8 426 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 TMTC1Q8IUR5 882 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 KCTD17Q8N5Z5 321 aa22.92■■□□□ 1.26
SMPDL3A-203ENST00000539041 SYT2Q8N9I0 419 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms