RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CDK8P49336 464 aa12.19□□□□□ -0.46
LINC00346-201ENST00000538077 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
LINC00346-201ENST00000538077 PNMA8AQ86V59 439 aaPredicted RBP12.19□□□□□ -0.46
LINC00346-201ENST00000538077 SERPINB13Q9UIV8 391 aa12.19□□□□□ -0.46
LINC00346-201ENST00000538077 ABCB11O95342 1321 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 F5H423 210 aaPredicted RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 CASQ2O14958 399 aaPredicted RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 KRT1P04264 644 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 NR5A1Q13285 461 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 ZMYM1Q5SVZ6 1142 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 RUFY4Q6ZNE9 571 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 OR8K1Q8NGG5 319 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 MAPK4P31152 587 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 NFX1Q12986 1120 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 FAM133AQ8N9E0 248 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 PI4KBQ9UBF8 816 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 TBC1D9BQ66K14 1250 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 ZWILCHQ9H900 591 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 GH2P01242 217 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 ZNF18P17022 549 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 CRKP46108 304 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 CDC26Q8NHZ8 85 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 PPP2R2CQ9Y2T4 447 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 COPB1P53618 953 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 ANKRD20A3Q5VUR7 823 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 RWDD4Q6NW29 188 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 GCNAQ96QF7 691 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 TDRD3Q9H7E2 651 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 METTL14Q9HCE5 456 aaKnown RBP12.18□□□□□ -0.46
LINC00346-201ENST00000538077 HYOU1Q9Y4L1 999 aa12.18□□□□□ -0.46
LINC00346-201ENST00000538077 KDM5CP41229 1560 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 XPOTO43592 962 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 AFPP02771 609 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 GPATCH4Q5T3I0 446 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 RNF207Q6ZRF8 634 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 TRIM58Q8NG06 486 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 CACTINQ8WUQ7 758 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 POLD4Q9HCU8 107 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 ZHX2Q9Y6X8 837 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 BAG2O95816 211 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 CASP14P31944 242 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 RBL2Q08999 1139 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 B4GALNT4Q76KP1 1039 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 MTRQ99707 1265 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 LMCD1Q9NZU5 365 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 KRT33BQ14525 404 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 SIX6OS1Q8N1H7 587 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 SYNE4Q8N205 404 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 ATP6V1E2Q96A05 226 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 RMDN2Q96LZ7 410 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 TACO1Q9BSH4 297 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 CPVLQ9H3G5 476 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 FAM114A2Q9NRY5 505 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 MTMR6Q9Y217 621 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
LINC00346-201ENST00000538077 MMEL1Q495T6 779 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 CCDC17Q96LX7 622 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 WRNIP1Q96S55 665 aa12.17□□□□□ -0.46
LINC00346-201ENST00000538077 PLEKHA8P1O95397 391 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 SESN3P58005 492 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 DARS2Q6PI48 645 aaKnown RBP12.16□□□□□ -0.46
LINC00346-201ENST00000538077 EXT2Q93063 718 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 RPF1Q9H9Y2 349 aaKnown RBP12.16□□□□□ -0.46
LINC00346-201ENST00000538077 GCNT4Q9P109 453 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
LINC00346-201ENST00000538077 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 PFDN6O15212 129 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 HEXIM1O94992 359 aaKnown RBP12.16□□□□□ -0.46
LINC00346-201ENST00000538077 CMA1P23946 247 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 ELF1P32519 619 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 SSTR3P32745 418 aaPredicted RBP12.16□□□□□ -0.46
LINC00346-201ENST00000538077 CXCR5P32302 372 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 DNAAF3Q8N9W5 541 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms