RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 FAM169AQ9Y6X4 670 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 ECM29Q5VYK3 1845 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 ZNF532Q9HCE3 1301 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 UNCXA6NJT0 531 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 LGALS16A8MUM7 142 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 EIF3HO15372 352 aaKnown RBP eCLIP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 TACC1O75410 805 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 PCCAP05165 728 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 MYL1P05976 194 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CALM1P0DP23 149 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CALM2P0DP24 149 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CALM3P0DP25 149 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 PRLRP16471 622 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 PDE6AP16499 860 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 TNFRSF8P28908 595 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 GGCXP38435 758 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CCT6AP40227 531 aaKnown RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 TRAPPC10P48553 1259 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 DNM2P50570 870 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 IRAK1P51617 712 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 EPHB4P54760 987 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 UBXN2AP68543 259 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 SKOR1P84550 965 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CDK17Q00537 523 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 UBXN1Q04323 297 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 PRKCZQ05513 592 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 GRIN1Q05586 938 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 SUPT20HL1Q3ZLR7 823 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 HSP90AB3PQ58FF7 597 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 FAM109BQ6ICB4 259 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 EMBQ6PCB8 327 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 C17orf99Q6UX52 265 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 ZNF572Q7Z3I7 529 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 FAM114A1Q8IWE2 563 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CDAN1Q8IWY9 1227 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 IFNL3Q8IZI9 196 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CCDC155Q8N6L0 562 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 MB21D1Q8N884 522 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 AENQ8WTP8 325 aaKnown RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 NELFBQ8WX92 580 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CCDC47Q96A33 483 aaKnown RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 ZFP91Q96JP5 570 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 STRBPQ96SI9 672 aaKnown RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 MMS19Q96T76 1030 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 VPS16Q9H269 839 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 THAP9Q9H5L6 903 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CABP5Q9NP86 173 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 RBM28Q9NW13 759 aaKnown RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 GABRQQ9UN88 632 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 MGAMO43451 1857 aa8.64□□□□□ -1.03
CPSF7-216ENST00000536548 COL1A1P02452 1464 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-216ENST00000536548 WDFY4Q6ZS81 3184 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 A0A0U1RQJ8 604 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 SRRM3A6NNA2 597 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 BTBD19C9JJ37 291 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 PRPF3O43395 683 aaKnown RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 ZEB2O60315 1214 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 IDH1O75874 414 aaKnown RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 CSF1RP07333 972 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 ELNP15502 786 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 TCP1P17987 556 aaKnown RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 MCAMP43121 646 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 CCT5P48643 541 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 GTF2A2P52657 109 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 GNGT1P63211 74 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 KIF5AQ12840 1032 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 VGLL4Q14135 290 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 SPA17Q15506 151 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 MEA1Q16626 185 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 GLE1Q53GS7 698 aaKnown RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 STRIP1Q5VSL9 837 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 TMED8Q6PL24 325 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 NECAB2Q7Z6G3 386 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 TXNRD3Q86VQ6 643 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 ZNF654Q8IZM8 581 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 CNPY4Q8N129 248 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 FANCBQ8NB91 859 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 TRIM58Q8NG06 486 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 ATRIPQ8WXE1 791 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 UBAC1Q9BSL1 405 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 MYL10Q9BUA6 226 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 KAT14Q9H8E8 782 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 VEZTQ9HBM0 779 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 A1CFQ9NQ94 594 aaKnown RBP8.63□□□□□ -1.03
CPSF7-216ENST00000536548 ZSWIM5Q9P217 1185 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 TAOK2Q9UL54 1235 aa8.63□□□□□ -1.03
CPSF7-216ENST00000536548 XDHP47989 1333 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PDS5AQ29RF7 1337 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 MYO3BQ8WXR4 1341 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 A0A1W2PQJ5 194 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 ANKRD18BA2A2Z9 1011 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 IRS4O14654 1257 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 ATP1A1P05023 1023 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PARP1P09874 1014 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 IDEP14735 1019 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms