RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PDE4DQ08499 809 aa12.62□□□□□ -0.39
CSDE1-215ENST00000533818 BTG3Q14201 252 aaPredicted RBP12.62□□□□□ -0.39
CSDE1-215ENST00000533818 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
CSDE1-215ENST00000533818 SLC9C2Q5TAH2 1124 aa12.62□□□□□ -0.39
CSDE1-215ENST00000533818 ZC3H14Q6PJT7 736 aaKnown RBP12.62□□□□□ -0.39
CSDE1-215ENST00000533818 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
CSDE1-215ENST00000533818 ATP8B4Q8TF62 1192 aa12.62□□□□□ -0.39
CSDE1-215ENST00000533818 S1PR5Q9H228 398 aa12.62□□□□□ -0.39
CSDE1-215ENST00000533818 RALGAPA2Q2PPJ7 1873 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 ASGR2P07307 311 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 MMP3P08254 477 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 BMP3P12645 472 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 PDE6AP16499 860 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 NPR3P17342 541 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 PSEN2P49810 448 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
CSDE1-215ENST00000533818 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
CSDE1-215ENST00000533818 NAALADL2Q58DX5 795 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 VN1R2Q8NFZ6 395 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 MICAL1Q8TDZ2 1067 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 POF1BQ8WVV4 589 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 RTKNQ9BST9 563 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 APOL5Q9BWW9 433 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
CSDE1-215ENST00000533818 DBNLQ9UJU6 430 aaKnown RBP12.61□□□□□ -0.39
CSDE1-215ENST00000533818 ZFYVE26Q68DK2 2539 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 PRR5-ARHGAP8B1AHC4 643 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 C2CD4DB7Z1M9 353 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 GNAI3P08754 354 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 STAT2P52630 851 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 ARHGAP8P85298 464 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
CSDE1-215ENST00000533818 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
CSDE1-215ENST00000533818 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
CSDE1-215ENST00000533818 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 RIN2Q8WYP3 895 aaPredicted RBP12.6□□□□□ -0.39
CSDE1-215ENST00000533818 OSBPL7Q9BZF2 842 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 TLR7Q9NYK1 1049 aaKnown RBP12.6□□□□□ -0.39
CSDE1-215ENST00000533818 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
CSDE1-215ENST00000533818 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 ARIH2O95376 493 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 TECP42680 631 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 SNAP25P60880 206 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 MFSD10Q14728 455 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 DGKDQ16760 1214 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 CHST3Q7LGC8 479 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 FAM160B2Q86V87 743 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 SUMF1Q8NBK3 374 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 APBB2Q92870 758 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 CCDC8Q9H0W5 538 aaPredicted RBP12.59□□□□□ -0.39
CSDE1-215ENST00000533818 NCDNQ9UBB6 729 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
CSDE1-215ENST00000533818 FLNBO75369 2602 aaKnown RBP12.59□□□□□ -0.39
CSDE1-215ENST00000533818 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 GH1P01241 217 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 LMNB2Q03252 620 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 ANKRD54Q6NXT1 300 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 SERINC5Q86VE9 423 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 GMCL1P1Q8NEA9 526 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 MKL1Q969V6 931 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 MPHOSPH6Q99547 160 aaKnown RBP12.58□□□□□ -0.4
CSDE1-215ENST00000533818 CDCA3Q99618 268 aaPredicted RBP12.58□□□□□ -0.4
CSDE1-215ENST00000533818 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
CSDE1-215ENST00000533818 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
CSDE1-215ENST00000533818 MYH8P13535 1937 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 PTPDC1A2A3K4 754 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 STK25O00506 426 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 SP9P0CG40 484 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 RASA1P20936 1047 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 HIC1Q14526 733 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 DUSP6Q16828 381 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 PPM1JQ5JR12 505 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 VARS2Q5ST30 1063 aaKnown RBP12.57□□□□□ -0.4
CSDE1-215ENST00000533818 SYCE2Q6PIF2 218 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 TMEM184AQ6ZMB5 413 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 CRIPAKQ8N1N5 446 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 ZNF689Q96CS4 500 aaPredicted RBP12.57□□□□□ -0.4
CSDE1-215ENST00000533818 MKNK2Q9HBH9 465 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 ERVK-5Q9HDB9 667 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 FBXL21Q9UKT6 434 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 MRPL42Q9Y6G3 142 aaKnown RBP12.57□□□□□ -0.4
CSDE1-215ENST00000533818 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
CSDE1-215ENST00000533818 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 HAS3O00219 553 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 CTSHP09668 335 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 HOXB8P17481 243 aaPredicted RBP12.56□□□□□ -0.4
CSDE1-215ENST00000533818 CALML3P27482 149 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 ARHGAP1Q07960 439 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms