RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 MAP3K7CLP57077 242 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 MESDQ14696 234 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 RAPH1Q70E73 1250 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 LARGE2Q8N3Y3 721 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 DHX38Q92620 1227 aaKnown RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 CDHR1Q96JP9 859 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 AMNQ9BXJ7 453 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 USP44Q9H0E7 712 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 TYW5A2RUC4 315 aaKnown RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 FGAP02671 866 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 CCNE1P24864 410 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ARL6IP4Q66PJ3 421 aaKnown RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 PCGF5Q86SE9 256 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 POMGNT1Q8WZA1 660 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 C8orf37Q96NL8 207 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 MMS19Q96T76 1030 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 FRMD3A2A2Y4 597 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 GSTA4O15217 222 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ITKQ08881 620 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 TMEM60Q9H2L4 133 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 MAN1B1Q9UKM7 699 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 SATB2Q9UPW6 733 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 AATKQ6ZMQ8 1374 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 PLEKHG1Q9ULL1 1385 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ARL4AP40617 200 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 MAGEA9P43362 315 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 DHX9Q08211 1270 aaKnown RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 DYNC1I2Q13409 638 aaKnown RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 IQCB1Q15051 598 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 CERKLQ49MI3 558 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ODR4Q5SWX8 454 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 KRT80Q6KB66 452 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 TTC25Q96NG3 672 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 RPS6KC1Q96S38 1066 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ZMYND12Q9H0C1 365 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 SH3GLB2Q9NR46 395 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 SLC12A6Q9UHW9 1150 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 NUB1Q9Y5A7 615 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ANO9A1A5B4 782 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 TESPA1A2RU30 521 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 PPARGP37231 505 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 TMED2Q15363 201 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 TTBK2Q6IQ55 1244 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 CENPUQ71F23 418 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 ARHGAP18Q8N392 663 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 FMO2Q99518 471 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 SRPRBQ9Y5M8 271 aaKnown RBP8.22□□□□□ -1.09
CTNND1-233ENST00000532787 MIF4GDA9UHW6 222 aaKnown RBP8.21□□□□□ -1.09
CTNND1-233ENST00000532787 CHEK2O96017 543 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 KRT1P04264 644 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.09
CTNND1-233ENST00000532787 CDR2Q01850 454 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 IFRD2Q12894 506 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-233ENST00000532787 ART3Q13508 389 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 NSUN7Q8NE18 718 aaKnown RBP8.21□□□□□ -1.09
CTNND1-233ENST00000532787 PPWD1Q96BP3 646 aaKnown RBP8.21□□□□□ -1.09
CTNND1-233ENST00000532787 BPIFA3Q9BQP9 254 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 PARD6BQ9BYG5 372 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 NHEJ1Q9H9Q4 299 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-233ENST00000532787 DONSONQ9NYP3 566 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 PCDHA13Q9Y5I0 950 aa8.21□□□□□ -1.09
CTNND1-233ENST00000532787 MMP1P03956 469 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 MX2P20592 715 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 THOC5Q13769 683 aaKnown RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 RCN2Q14257 317 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 FSCBQ5H9T9 825 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 KLC3Q6P597 504 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 EP400NLQ6ZTU2 488 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 LINC00301Q8NCQ3 95 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 CLIC6Q96NY7 704 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 MXD3Q9BW11 206 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 BTG4Q9NY30 223 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 CSADQ9Y600 493 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 PRPF3O43395 683 aaKnown RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 NDUFA10O95299 355 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 A1BGP04217 495 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 DLATP10515 647 aaKnown RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 ESRRAP11474 423 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 ATICP31939 592 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 DR1Q01658 176 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 ICA1Q05084 483 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 ORC2Q13416 577 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 CASP8Q14790 479 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 ZYXQ15942 572 aaKnown RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 MFSD14BQ5SR56 506 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 KAZNQ674X7 775 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 TCP11Q8WWU5 503 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 LGR6Q9HBX8 967 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 ATP8A1Q9Y2Q0 1164 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 SYNMO15061 1565 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 PLTPP55058 493 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 IGBP1P78318 339 aa8.21□□□□□ -1.1
CTNND1-233ENST00000532787 KIF23Q02241 960 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-233ENST00000532787 KCTD16Q68DU8 428 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms