RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 DEFB129Q9H1M3 183 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 CUEDC2Q9H467 287 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 ZBTB33Q86T24 672 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 IFNAR1P17181 557 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 MEIS1O00470 390 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 STK25O00506 426 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 EBAG9O00559 213 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 CEP104O60308 925 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 CMA1P23946 247 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 ADAM9Q13443 819 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
PTPRK-221ENST00000532331 RRAGAQ7L523 313 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 CCDC51Q96ER9 411 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 FAM207AQ9NSI2 230 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-221ENST00000532331 SETDB1Q15047 1291 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
PTPRK-221ENST00000532331 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 GSDMBQ8TAX9 411 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
PTPRK-221ENST00000532331 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 MXD3Q9BW11 206 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 MYO1AQ9UBC5 1043 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 ZNF521Q96K83 1311 aa12.36□□□□□ -0.43
PTPRK-221ENST00000532331 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-221ENST00000532331 TMEM206Q9H813 350 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 RRAGCQ9HB90 399 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 MTMR6Q9Y217 621 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 STAT1P42224 750 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 RPS6KA1Q15418 735 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 LPAR1Q92633 364 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 TBC1D22BQ9NU19 505 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 IGSF3O75054 1194 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 KIF11P52732 1056 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 MYO1EQ12965 1108 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 SCYL2Q6P3W7 929 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 PPM1KQ8N3J5 372 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 SPATA33Q96N06 139 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 NLRC4Q9NPP4 1024 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 RGS12O14924 1447 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 KCNJ18B7U540 433 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 STAM2O75886 525 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 ANXA13P27216 316 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 GTF2A2P52657 109 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 KCNJ12Q14500 433 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 TRIM50Q86XT4 487 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 URGCPQ8TCY9 931 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 MAIP1Q8WWC4 291 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 LRRC7Q96NW7 1537 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 RPN1P04843 607 aaKnown RBP12.35□□□□□ -0.43
PTPRK-221ENST00000532331 CYP2B6P20813 491 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 PSMC4P43686 418 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 PDE6CP51160 858 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 TFAMQ00059 246 aaKnown RBP12.35□□□□□ -0.43
PTPRK-221ENST00000532331 MORC3Q14149 939 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 DSTYKQ6XUX3 929 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
PTPRK-221ENST00000532331 NSUN4Q96CB9 384 aaKnown RBP12.35□□□□□ -0.43
PTPRK-221ENST00000532331 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 FCGRTP55899 365 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 OSTNP61366 133 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 RASSF7Q02833 373 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 LONRF3Q496Y0 759 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 IFIH1Q9BYX4 1025 aaKnown RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 XPO4Q9C0E2 1151 aaKnown RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 RPF1Q9H9Y2 349 aaKnown RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 MMP1P03956 469 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 AKR1B1P15121 316 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 CFAP221Q4G0U5 840 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 TWF2Q6IBS0 349 aaKnown RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 CROCCP2Q86T23 111 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 DAAM2Q86T65 1068 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 TIGD1Q96MW7 591 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 WDR64B1ANS9 1081 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 KRT76Q01546 638 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 OR6J1Q8NGC5 347 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 CLIC6Q96NY7 704 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 CARD6Q9BX69 1037 aa12.34□□□□□ -0.43
PTPRK-221ENST00000532331 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-221ENST00000532331 K7ERI5 159 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 ITIH3Q06033 890 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 KRT81Q14533 505 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 SURF1Q15526 300 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms