RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 RANBP17Q9H2T7 1088 aaKnown RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 PPP1R1BQ9UD71 204 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 B4DLN1 442 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 KIF20AO95235 890 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 CFBP00751 764 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 CYP3A4P08684 503 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 RPS12P25398 132 aaKnown RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 CIITAP33076 1130 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 STAT3P40763 770 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 COASYQ13057 564 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 KIAA1755Q5JYT7 1200 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 CENPPQ6IPU0 288 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 NUP58Q9BVL2 599 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 ABCB11O95342 1321 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 BRCA1P38398 1863 aaKnown RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 E9PMD0 336 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 OPLAHO14841 1288 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 SLU7O95391 586 aaKnown RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 TAL1P17542 331 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 CASQ1P31415 396 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 KRT9P35527 623 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 FAM26FQ5R3K3 315 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 MYOCDQ8IZQ8 938 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 P2RX7Q99572 595 aaKnown RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 DESI2Q9BSY9 194 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 MTFR1LQ9H019 292 aa9.38□□□□□ -0.91
HMGB4-203ENST00000519684 LUC7L2Q9Y383 392 aaKnown RBP9.38□□□□□ -0.91
HMGB4-203ENST00000519684 FAM86B1E9PN63 330 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 MED24O75448 989 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 FAM86B2P0C5J1 330 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 FECHP22830 423 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 GNG11P61952 73 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 RASA3Q14644 834 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 MTF1Q14872 753 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 RAD9BQ6WBX8 426 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 ZNF507Q8TCN5 953 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 DNAJC19Q96DA6 116 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 ZNF341Q9BYN7 854 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
HMGB4-203ENST00000519684 DNM3Q9UQ16 869 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 POTEFA5A3E0 1075 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 MSH4O15457 936 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
HMGB4-203ENST00000519684 RPA1P27694 616 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
HMGB4-203ENST00000519684 MAP3K10Q02779 954 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 EHHADHQ08426 723 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 TRIM65Q6PJ69 517 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 FOXR2Q6PJQ5 311 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 OR8K1Q8NGG5 319 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 LENG9Q96B70 501 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 IQCDQ96DY2 449 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 PDCL3Q9H2J4 239 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 GINM1Q9NU53 330 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 ZNHIT6Q9NWK9 470 aaKnown RBP9.37□□□□□ -0.91
HMGB4-203ENST00000519684 CAPN11Q9UMQ6 739 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 ADGRG1Q9Y653 693 aa9.37□□□□□ -0.91
HMGB4-203ENST00000519684 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 SPIRE1Q08AE8 756 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 LRRC41Q15345 812 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 HERC4Q5GLZ8 1057 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 CATSPER3Q86XQ3 398 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 EEF2KMTQ96G04 330 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 ZHX3Q9H4I2 956 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 L2HGDHQ9H9P8 463 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 PGAP2Q9UHJ9 254 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 TTC26A0AVF1 554 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 NFKBIEO00221 500 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 KIF5CO60282 957 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 CYP11B2P19099 503 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 SLC12A3P55017 1021 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 NCBP1Q09161 790 aaKnown RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 MAN2A1Q16706 1144 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 VWA3BQ502W6 1294 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 LDHDQ86WU2 507 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 KCTD17Q8N5Z5 321 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 ANKRD7Q92527 254 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 LPAR1Q92633 364 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 POLR3CQ9BUI4 534 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 VAV3Q9UKW4 847 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
HMGB4-203ENST00000519684 CCPG1Q9ULG6 757 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms