RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	IDE	P14735	1019 aa		11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	ARHGAP4	P98171	946 aa		11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	TEX35	Q5T0J7	233 aa		11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	KRT79	Q5XKE5	535 aa		11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	SYT10	Q6XYQ8	523 aa		11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	ADD3	Q9UEY8	706 aa	Known RBP	11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	RWDD2A	Q9UIY3	292 aa		11.75	□□□□□ -0.53
CDK18-222	ENST00000515494	PES1	O00541	588 aa	Known RBP	11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	GOLGA6L1	Q8N7Z2	621 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	AGBL1	Q96MI9	1066 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	RHOBTB3	O94955	611 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	HMGCS2	P54868	508 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	EXOC1	Q9NV70	894 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	ARFGEF1	Q9Y6D6	1849 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	FAM86B1	E9PN63	330 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	N4BP3	O15049	544 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	PEX10	O60683	326 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	FAM86B2	P0C5J1	330 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	ERCC3	P19447	782 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	CACNB1	Q02641	598 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	SV2B	Q7L1I2	683 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	TC2N	Q8N9U0	490 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	GLIS3	Q8NEA6	775 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	LARP4B	Q92615	738 aa	Known RBP	11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	PICK1	Q9NRD5	415 aa		11.74	□□□□□ -0.53
CDK18-222	ENST00000515494	SPDYE3	A6NKU9	549 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	NKRF	O15226	690 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	FLOT1	O75955	427 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	CYP2C19	P33261	490 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	TTLL12	Q14166	644 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	IRF2BP1	Q8IU81	584 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	TRIM47	Q96LD4	638 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	NCAPG	Q9BPX3	1015 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	SRRT	Q9BXP5	876 aa	Known RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	COL2A1	P02458	1487 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	POTEB3	A0JP26	581 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	POTEC	B2RU33	542 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	KCNJ18	B7U540	433 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494		E9PMD0	336 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	TBX2	Q13207	712 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	KCNJ12	Q14500	433 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	POTEB	Q6S5H4	581 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	KRT26	Q7Z3Y9	468 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	WNK4	Q96J92	1243 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	RAB34	Q9BZG1	259 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	CTNND1	O60716	968 aa	Known RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	NOP2	P46087	812 aa	Known RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	KCNB1	Q14721	858 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	DCAF15	Q66K64	600 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	SULF1	Q8IWU6	871 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	KIAA0895	Q8NCT3	520 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	DCPS	Q96C86	337 aa	Known RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	ZNF408	Q9H9D4	720 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	RAVER2	Q9HCJ3	691 aa	Known RBP	11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	KIAA1024	Q9UPX6	916 aa		11.73	□□□□□ -0.53
CDK18-222	ENST00000515494	RBL2	Q08999	1139 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	ORC2	Q13416	577 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	PDIA5	Q14554	519 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	LRRC41	Q15345	812 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	PTPN14	Q15678	1187 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	TCP11X2	Q5H9J9	407 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	BTNL9	Q6UXG8	535 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	C7orf25	Q9BPX7	421 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	CUEDC2	Q9H467	287 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	POLD4	Q9HCU8	107 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	SBF1	O95248	1867 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	MYO1C	O00159	1063 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	MEIS1	O00470	390 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	CASQ1	P31415	396 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	DPY19L2	Q6NUT2	758 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	TMEM139	Q8IV31	216 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	CHURC1	Q8WUH1	139 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	RAD54L	Q92698	747 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	DDX12P	Q92771	950 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	PPP1R13B	Q96KQ4	1090 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	EMILIN3	Q9NT22	766 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	TBC1D7	Q9P0N9	293 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	CLEC11A	Q9Y240	323 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	PSMA7	O14818	248 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	POTEI	P0CG38	1075 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	POTEJ	P0CG39	1038 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	ALAS1	P13196	640 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	COPB1	P53618	953 aa	Known RBP	11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	MAP3K10	Q02779	954 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	MTF1	Q14872	753 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	ANKRD40	Q6AI12	368 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	SH2D4A	Q9H788	454 aa		11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	ADARB2	Q9NS39	739 aa	Known RBP	11.72	□□□□□ -0.53
CDK18-222	ENST00000515494	RNF225	M0QZC1	329 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK18-222	ENST00000515494	GCFC2	P16383	781 aa	Known RBP	11.71	□□□□□ -0.53
CDK18-222	ENST00000515494	PTPRA	P18433	802 aa		11.71	□□□□□ -0.53
CDK18-222	ENST00000515494	VCAM1	P19320	739 aa		11.71	□□□□□ -0.53
CDK18-222	ENST00000515494	AMPD3	Q01432	767 aa		11.71	□□□□□ -0.53
CDK18-222	ENST00000515494	DESI2	Q9BSY9	194 aa		11.71	□□□□□ -0.53
CDK18-222	ENST00000515494	KCNMB3	Q9NPA1	279 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms