RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ARL6IP6Q8N6S5 226 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 STAG1Q8WVM7 1258 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 DISC1Q9NRI5 854 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF277Q9NRM2 450 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 NOC2LQ9Y3T9 749 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MAP4K5Q9Y4K4 846 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 CHL1O00533 1208 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 NOL3O60936 208 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GUCY1A3Q02108 690 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MRPL58Q14197 206 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MVPQ14764 893 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GEN1Q17RS7 908 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 SLC27A3Q5K4L6 730 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 NUTM2GQ5VZR2 741 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 SDCCAG8Q86SQ7 713 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MRPL50Q8N5N7 158 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 JMYQ8N9B5 988 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 RSRC1Q96IZ7 334 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GJD4Q96KN9 370 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MPHOSPH8Q99549 860 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 RUSC1Q9BVN2 902 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 NPHS2Q9NP85 383 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 FBXL21Q9UKT6 434 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 SNX6Q9UNH7 406 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 THRAP3Q9Y2W1 955 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 BCORQ6W2J9 1755 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 BRINP1O60477 761 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MSH2P43246 934 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 PPP2R5DQ14738 602 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 AKAP4Q5JQC9 854 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 CFAP161Q6P656 301 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 IPCEF1Q8WWN9 437 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MTFMTQ96DP5 389 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 API5Q9BZZ5 524 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 OBP2AQ9NY56 170 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 BAIAP2L1Q9UHR4 511 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF215Q9UL58 517 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 COL5A2P05997 1499 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 A0A0G2JS52 829 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ADCY5O95622 1261 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC172P0C7W6 258 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 MAPK3P27361 379 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 KCNJ5P48544 419 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 GMFBP60983 142 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PLEKHO1Q53GL0 409 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SWT1Q5T5J6 900 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 GATAD2AQ86YP4 633 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SH2D3CQ8N5H7 860 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CNTD1Q8N815 330 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CENPTQ96BT3 561 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 INCENPQ9NQS7 918 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 THG1LQ9NWX6 298 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 GIT1Q9Y2X7 761 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CSADQ9Y600 493 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 FOXO3O43524 673 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 FGRP09769 529 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HSPA1AP0DMV8 641 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HSPA1BP0DMV9 641 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HADHAP40939 763 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CLDN10P78369 228 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 COL9A2Q14055 689 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 DDR2Q16832 855 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PARP10Q53GL7 1025 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PI16Q6UXB8 463 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF574Q6ZN55 896 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SYTL1Q8IYJ3 562 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TMEM57Q8N5G2 664 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 GBP7Q8N8V2 638 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 NAXEQ8NCW5 288 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 EXOC6Q8TAG9 804 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 AFG1LQ8WV93 481 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 THRSPQ92748 146 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 EFHD2Q96C19 240 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 MS4A4AQ96JQ5 239 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF512BQ96KM6 892 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 BCO2Q9BYV7 579 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 BTG4Q9NY30 223 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CWC15Q9P013 229 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ANKRD6Q9Y2G4 727 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 FOXN3O00409 490 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 GRIN3BO60391 1043 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 MAP3K6O95382 1288 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CLTBP09497 229 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PTPREP23469 700 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SARSP49591 514 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZBED6P86452 979 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 EIF2B5Q13144 721 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 C6orf118Q5T5N4 469 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 RNF219Q5W0B1 726 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PKN3Q6P5Z2 889 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 LRRTM3Q86VH5 581 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 LRRN4CLQ8ND94 238 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ADCY4Q8NFM4 1077 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TGFBRAP1Q8WUH2 860 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF566Q969W8 418 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HSPBAP1Q96EW2 488 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 NOX5Q96PH1 765 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 OXCT2Q9BYC2 517 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 EDEM3Q9BZQ6 932 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CEP44Q9C0F1 390 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 312.9 ms