RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 PCDHA11Q9Y5I1 949 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 EPOPA6NHQ4 379 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 KLRF2D3W0D1 207 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 TK2O00142 265 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 HAS3O00219 553 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 RFXAPO00287 272 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 EIF3JO75822 258 aaKnown RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 GH1P01241 217 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 NR3C2P08235 984 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 CYP21A2P08686 494 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 HOXD8P13378 290 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 ATP2A2P16615 1042 aaKnown RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 CHMLP26374 656 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 HOXA13P31271 388 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 ANTXR2P58335 489 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 SP2Q02086 613 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 TROAPQ12815 778 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 LAPTM4AQ15012 233 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 STXBP2Q15833 593 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 CCDC85BQ15834 202 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 PTGISQ16647 500 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 FAM47CQ5HY64 1035 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 IFIT1BQ5T764 474 aaKnown RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 CHST3Q7LGC8 479 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 SESTD1Q86VW0 696 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 PPM1EQ8WY54 764 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 GPKOWQ92917 476 aaPredicted RBP eCLIP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 WNT8BQ93098 351 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 EMID1Q96A84 441 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 ZFP91Q96JP5 570 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 IWS1Q96ST2 819 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 AMNQ9BXJ7 453 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 CNNM2Q9H8M5 875 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 SLC28A3Q9HAS3 691 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 GPHNQ9NQX3 736 aaPredicted RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 CTNNA3Q9UI47 895 aa7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 MRPL11Q9Y3B7 192 aaKnown RBP7.5□□□□□ -1.21
HMGN1P16-201ENST00000508308 ZBBXA8MT70 800 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 ZBTB5O15062 677 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 CFBP00751 764 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 CA3P07451 260 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 PFKMP08237 780 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 RFC2P35250 354 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 ZNF200P98182 395 aaPredicted RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 RBL2Q08999 1139 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 MBTPS1Q14703 1052 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 GRM4Q14833 912 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 TRIM71Q2Q1W2 868 aaKnown RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 BRDTQ58F21 947 aaPredicted RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 TJAP1Q5JTD0 557 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 ARHGEF16Q5VV41 709 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 MYSM1Q5VVJ2 828 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 PPP2R2DQ66LE6 453 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 TMCO2Q7Z6W1 182 aaPredicted RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 VSIG10LQ86VR7 867 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 MCF2L2Q86YR7 1114 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 PIGSQ96S52 555 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 GAS2L1Q99501 681 aaPredicted RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 PDCD2LQ9BRP1 358 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 UBAC1Q9BSL1 405 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 MTIF3Q9H2K0 278 aaKnown RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 RIOX1Q9H6W3 641 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 HDAC6Q9UBN7 1215 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 TELO2Q9Y4R8 837 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 SUPT16HQ9Y5B9 1047 aaKnown RBP7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 PCDHA1Q9Y5I3 950 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 DOCK5Q9H7D0 1870 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 RAD50Q92878 1312 aa7.49□□□□□ -1.21
HMGN1P16-201ENST00000508308 TCF20Q9UGU0 1960 aaKnown RBP7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 LCHNA4D1U4 455 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 B4DLN1 442 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 E7EWF7 191 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 SGSM2O43147 1006 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 DHX16O60231 1041 aaKnown RBP7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 SORBS3O60504 671 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 NBNO60934 754 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 F2P00734 622 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 CXCL10P02778 98 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 ZNF286BP0CG31 522 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 POU3F3P20264 500 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 IGFBP4P22692 258 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 PSEN2P49810 448 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 MRPL12P52815 198 aaKnown RBP7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 CHMP4BP1P59074 171 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 MRPS9P82933 396 aaKnown RBP7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 TAP1Q03518 808 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 PGM5Q15124 567 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 HSDL1Q3SXM5 330 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 KRT40Q6A162 431 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 HERC6Q8IVU3 1022 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 PPTC7Q8NI37 304 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 IGDCC4Q8TDY8 1250 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 AFAP1L1Q8TED9 768 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 MAP4K1Q92918 833 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 ASB2Q96Q27 587 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms