RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 VPS16Q9H269 839 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 KCND2Q9NZV8 630 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 LUC7L2Q9Y383 392 aaKnown RBP12.61□□□□□ -0.39
NFKB1-205ENST00000505458 GAP43P17677 238 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 STK4Q13043 487 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 MAN2A1Q16706 1144 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 AS3MTQ9HBK9 375 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 PANK4Q9NVE7 773 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 PPP2R3BQ9Y5P8 575 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 GYPCP04921 128 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 IDEP14735 1019 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 KIAA0895Q8NCT3 520 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 OR8K1Q8NGG5 319 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 LRRC15Q8TF66 581 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 ZNF592Q92610 1267 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 ABHD10Q9NUJ1 306 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 ICAM1P05362 532 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 ADKP55263 362 aaKnown RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 COASYQ13057 564 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 PRPF38AQ8NAV1 312 aaKnown RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 DNAI1Q9UI46 699 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 CAPN11Q9UMQ6 739 aa12.6□□□□□ -0.39
NFKB1-205ENST00000505458 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-205ENST00000505458 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
NFKB1-205ENST00000505458 CDK17Q00537 523 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 REXO1L1PQ8IX06 675 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 DNAJC19Q96DA6 116 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 KIAA1024Q9UPX6 916 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 BCRP11274 1271 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 CASP14P31944 242 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 FKBP3Q00688 224 aaKnown RBP12.59□□□□□ -0.39
NFKB1-205ENST00000505458 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 ANKRD40Q6AI12 368 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 GPBP1Q86WP2 473 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
NFKB1-205ENST00000505458 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
NFKB1-205ENST00000505458 MAPK8IP1Q9UQF2 711 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 TRIM49BA6NDI0 452 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 IPO7O95373 1038 aaKnown RBP12.59□□□□□ -0.39
NFKB1-205ENST00000505458 PTGER2P43116 358 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 JAG1P78504 1218 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 SPIRE1Q08AE8 756 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 STXBP4Q6ZWJ1 553 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 SYT2Q8N9I0 419 aaPredicted RBP12.59□□□□□ -0.39
NFKB1-205ENST00000505458 EHBP1Q8NDI1 1231 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 LENG9Q96B70 501 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 FAM184BQ9ULE4 1060 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 UBE4BO95155 1302 aa12.59□□□□□ -0.39
NFKB1-205ENST00000505458 KIF5CO60282 957 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 KRT9P35527 623 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 ECE1P42892 770 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 ZBED6P86452 979 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 TBC1D8BQ0IIM8 1120 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 RASA3Q14644 834 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 PDCL2Q8N4E4 241 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 RIT2Q99578 217 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 EYA4O95677 639 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
NFKB1-205ENST00000505458 ZNF662Q6ZS27 426 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 SLC5A5Q92911 643 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 ZNF341Q9BYN7 854 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 SEL1LQ9UBV2 794 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 MSH4O15457 936 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 CYLC1P35663 651 aaPredicted RBP12.58□□□□□ -0.4
NFKB1-205ENST00000505458 MARSP56192 900 aaKnown RBP12.58□□□□□ -0.4
NFKB1-205ENST00000505458 KRT83P78385 493 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 KIFC2Q96AC6 838 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
NFKB1-205ENST00000505458 OPLAHO14841 1288 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 FCER1AP12319 257 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 HSD17B4P51659 736 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 DYMQ7RTS9 669 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 WDR18Q9BV38 432 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
NFKB1-205ENST00000505458 VAV3Q9UKW4 847 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 CTDP1Q9Y5B0 961 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-205ENST00000505458 COL4A3BPQ9Y5P4 624 aa12.57□□□□□ -0.4
NFKB1-205ENST00000505458 TBCAO75347 108 aaKnown RBP12.57□□□□□ -0.4
NFKB1-205ENST00000505458 CFBP00751 764 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms