RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
ECHDC3-204ENST00000495787 SLC26A4O43511 780 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 TLR2O60603 784 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 STAT3P40763 770 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 PRMT2P55345 433 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 NLRP12P59046 1061 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 LACTBP83111 547 aaPredicted RBP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 PNOCQ13519 176 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 ANO6Q4KMQ2 910 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 PRR16Q569H4 304 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 RRAGBQ5VZM2 374 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 SNRNP48Q6IEG0 339 aaKnown RBP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 FAM200AQ8TCP9 573 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 SYTL5Q8TDW5 730 aaPredicted RBP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 DPF3Q92784 378 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 ERCC4Q92889 916 aaPredicted RBP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 FAM20AQ96MK3 541 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 TEX13BQ9BXU2 312 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 DISC1Q9NRI5 854 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 LRWD1Q9UFC0 647 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 AGTPBP1Q9UPW5 1226 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 FRMPD4Q14CM0 1322 aa12.09□□□□□ -0.47
ECHDC3-204ENST00000495787 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 DLL1O00548 723 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 SMC2O95347 1197 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 FAM86B2P0C5J1 330 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 CDC25AP30304 524 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 STAT6P42226 847 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 SNAPC2Q13487 334 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 MOGSQ13724 837 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 KARSQ15046 597 aaKnown RBP12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 NT5DC1Q5TFE4 455 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 RASSF8Q8NHQ8 419 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 LENG9Q96B70 501 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 CALML4Q96GE6 196 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 PAGE5Q96GU1 130 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 COL20A1Q9P218 1284 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 PCDHA12Q9UN75 941 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 RIPK3Q9Y572 518 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 PCDHA5Q9Y5H7 936 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
ECHDC3-204ENST00000495787 IGLV3-22A0A075B6J6 115 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 CETPP11597 493 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 OSBPP22059 807 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 SARSP49591 514 aaKnown RBP12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 RPS6P62753 249 aaKnown RBP12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 SETQ01105 290 aaPredicted RBP12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 NSMFQ6X4W1 530 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 NIPA1Q7RTP0 329 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 TRIML1Q8N9V2 468 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 CHST13Q8NET6 341 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 SPATA20Q8TB22 786 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 SMARCE1Q969G3 411 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 MMTAG2Q9BU76 263 aaKnown RBP12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 HTATIP2Q9BUP3 242 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 ARHGAP39Q9C0H5 1083 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 NAT10Q9H0A0 1025 aaKnown RBP12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 DNAJC25Q9H1X3 360 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 ACAD9Q9H845 621 aa12.07□□□□□ -0.48
ECHDC3-204ENST00000495787 POTEMA6NI47 508 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 MEIS1O00470 390 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 MSH4O15457 936 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 MYL1P05976 194 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 PLCG1P19174 1290 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 AFMP43652 599 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 ZNF165P49910 485 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 UBXN2AP68543 259 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 DPYDQ12882 1025 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 GRB10Q13322 594 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 BAATQ14032 418 aaPredicted RBP12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 PLS1Q14651 629 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 PCNX4Q63HM2 1172 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 GPAT2Q6NUI2 795 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 SLC30A10Q6XR72 485 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 C11orf57Q6ZUT1 292 aaPredicted RBP12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
ECHDC3-204ENST00000495787 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms