RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ECE1P42892 770 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 ECM1Q16610 540 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 ANKRD40Q6AI12 368 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 DYMQ7RTS9 669 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 MBOAT7Q96N66 472 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 P2RX7Q99572 595 aaKnown RBP15.34■□□□□ 0.05
VCP-207ENST00000493886 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 SLC39A2Q9NP94 309 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 KCNMB3Q9NPA1 279 aa15.34■□□□□ 0.05
VCP-207ENST00000493886 PUF60Q9UHX1 559 aaKnown RBP15.34■□□□□ 0.05
VCP-207ENST00000493886 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 ARHGAP4P98171 946 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 MCTP2Q6DN12 878 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 KIFC2Q96AC6 838 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 LRRC27Q9C0I9 530 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 VPS33BQ9H267 617 aa15.33■□□□□ 0.05
VCP-207ENST00000493886 LGALS16A8MUM7 142 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 TRIM14Q14142 442 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 MOXD1Q6UVY6 613 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 NIM1KQ8IY84 436 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 SLC16A10Q8TF71 515 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 CRYGNQ8WXF5 182 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 UIMC1Q96RL1 719 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 ZCCHC17Q9NP64 241 aaKnown RBP15.33■□□□□ 0.04
VCP-207ENST00000493886 PRR12Q9ULL5 1215 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 ZNRF3Q9ULT6 936 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 MRFAP1Q9Y605 127 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 GOLGB1Q14789 3259 aaKnown RBP15.33■□□□□ 0.04
VCP-207ENST00000493886 SASH3O75995 380 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 TAL1P17542 331 aaPredicted RBP15.33■□□□□ 0.04
VCP-207ENST00000493886 HYIQ5T013 277 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 DDX12PQ92771 950 aa15.33■□□□□ 0.04
VCP-207ENST00000493886 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 ABL1P00519 1130 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 CCDC175P0C221 793 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 ACRBPQ8NEB7 543 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 RNF217Q8TC41 542 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 TMX2Q9Y320 296 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 SPDYE3A6NKU9 549 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 ZRANB2O95218 330 aaKnown RBP eCLIP15.32■□□□□ 0.04
VCP-207ENST00000493886 FOSP01100 380 aaPredicted RBP15.32■□□□□ 0.04
VCP-207ENST00000493886 IDEP14735 1019 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 FECHP22830 423 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 STAT2P52630 851 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 MAP3K9P80192 1104 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 KIAA1755Q5JYT7 1200 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 FKBP1CQ5VVH2 108 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 NT5C3AQ9H0P0 336 aa15.32■□□□□ 0.04
VCP-207ENST00000493886 PES1O00541 588 aaKnown RBP15.31■□□□□ 0.04
VCP-207ENST00000493886 FAM114A1Q8IWE2 563 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 CDAN1Q8IWY9 1227 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 SLFN12Q8IYM2 578 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 MTMR14Q8NCE2 650 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 EEF2KMTQ96G04 330 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 TMEM39BQ9GZU3 492 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 SEMA6BQ9H3T3 888 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 ABHD10Q9NUJ1 306 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 A0A1W2PQC6 194 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 RNF225M0QZC1 329 aaPredicted RBP15.31■□□□□ 0.04
VCP-207ENST00000493886 OPLAHO14841 1288 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 TNNT3P45378 269 aaPredicted RBP15.31■□□□□ 0.04
VCP-207ENST00000493886 CENPPQ6IPU0 288 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 TUBGCP2Q9BSJ2 902 aa15.31■□□□□ 0.04
VCP-207ENST00000493886 SREBF1P36956 1147 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 PRR16Q569H4 304 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
VCP-207ENST00000493886 CXCL9Q07325 125 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 EHHADHQ08426 723 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 Q4G0T1 1027 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 ZNF569Q5MCW4 686 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 GUF1Q8N442 669 aaKnown RBP15.3■□□□□ 0.04
VCP-207ENST00000493886 ETNPPLQ8TBG4 499 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 KIAA1024Q9UPX6 916 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 ADGRG1Q9Y653 693 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 B4DLN1 442 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 SLC26A4O43511 780 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 TBC1D12O60347 775 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 HOXA13P31271 388 aaPredicted RBP15.3■□□□□ 0.04
VCP-207ENST00000493886 KRT9P35527 623 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 DNM2P50570 870 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 GYS2P54840 703 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 PSMD2Q13200 908 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
VCP-207ENST00000493886 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 FAM83AQ86UY5 434 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 TMTC1Q8IUR5 882 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 DNAJC19Q96DA6 116 aa15.3■□□□□ 0.04
VCP-207ENST00000493886 POTEB3A0JP26 581 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 POTECB2RU33 542 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 E9PMD0 336 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms