RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZNF827Q17R98 1081 aa6.53□□□□□ -1.36
CCDC66-221ENST00000487739 STEAP3Q658P3 488 aa6.53□□□□□ -1.36
CCDC66-221ENST00000487739 FAM124AQ86V42 546 aa6.53□□□□□ -1.36
CCDC66-221ENST00000487739 C1orf159Q96HA4 380 aa6.53□□□□□ -1.36
CCDC66-221ENST00000487739 CLDND1Q9NY35 253 aa6.53□□□□□ -1.36
CCDC66-221ENST00000487739 CCDC9Q9Y3X0 531 aaKnown RBP6.53□□□□□ -1.36
CCDC66-221ENST00000487739 PCDHB4Q9Y5E5 795 aa6.53□□□□□ -1.36
CCDC66-221ENST00000487739 DGKIO75912 1065 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 LCP1P13796 627 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 KIAA2012Q0VF49 1180 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 MAP4K2Q12851 820 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 CR1LQ2VPA4 569 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 EMC4Q5J8M3 183 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 SLC35F1Q5T1Q4 408 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 DENND5AQ6IQ26 1287 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 STK32CQ86UX6 486 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 MCF2L2Q86YR7 1114 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 EPB41L1Q9H4G0 881 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 DTLQ9NZJ0 730 aa6.52□□□□□ -1.37
CCDC66-221ENST00000487739 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
CCDC66-221ENST00000487739 PPP2R2AP63151 447 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 BORAQ6PGQ7 559 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 HHIPL2Q6UWX4 724 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 LGI4Q8N135 537 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 KCTD13Q8WZ19 329 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 TOE1Q96GM8 510 aaKnown RBP6.51□□□□□ -1.37
CCDC66-221ENST00000487739 NPFFR2Q9Y5X5 522 aa6.51□□□□□ -1.37
CCDC66-221ENST00000487739 TCRBV5S2A0A599 114 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 MROH6A6NGR9 719 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 MAFKO60675 156 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 TADA3O75528 432 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 CAPNS1P04632 268 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 ITGB3P05106 788 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 MCTP2Q6DN12 878 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 ARRDC4Q8NCT1 418 aa6.5□□□□□ -1.37
CCDC66-221ENST00000487739 HNRNPLLQ8WVV9 542 aaKnown RBP6.5□□□□□ -1.37
CCDC66-221ENST00000487739 A0A1W2PQU0 124 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 DDX3XO00571 662 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC66-221ENST00000487739 PLATP00750 562 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 GRIA2P42262 883 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 ADAM9Q13443 819 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 DDR2Q16832 855 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 PRAMEF18Q5VWM3 479 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 TXNDC5Q8NBS9 432 aaKnown RBP6.49□□□□□ -1.37
CCDC66-221ENST00000487739 PHOSPHO1Q8TCT1 267 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC66-221ENST00000487739 CLIC6Q96NY7 704 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 IER2Q9BTL4 223 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 ST7Q9NRC1 585 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 MYOTQ9UBF9 498 aa6.49□□□□□ -1.37
CCDC66-221ENST00000487739 KRIT1O00522 736 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 CYP7B1O75881 506 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 ZNF28P17035 718 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 CYP4F22Q6NT55 531 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 TEPPQ6URK8 271 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 ANKS3Q6ZW76 656 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 GGNQ86UU5 652 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 LCORQ96JN0 433 aaPredicted RBP6.48□□□□□ -1.37
CCDC66-221ENST00000487739 WRNIP1Q96S55 665 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 TMEM209Q96SK2 561 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 GPR20Q99678 358 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 SMOC1Q9H4F8 434 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 INVSQ9Y283 1065 aa6.48□□□□□ -1.37
CCDC66-221ENST00000487739 IQCA1LA6NCM1 817 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 MAGEA10P43363 369 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-221ENST00000487739 HSP90AA2PQ14568 343 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-221ENST00000487739 ZXDCQ2QGD7 858 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-221ENST00000487739 TBC1D10BQ4KMP7 808 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-221ENST00000487739 SLC43A3Q8NBI5 491 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 SGSM3Q96HU1 749 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 ZSWIM3Q96MP5 696 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 RBM15Q96T37 977 aaKnown RBP eCLIP6.47□□□□□ -1.37
CCDC66-221ENST00000487739 L2HGDHQ9H9P8 463 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 SMPD4Q9NXE4 827 aa6.47□□□□□ -1.37
CCDC66-221ENST00000487739 DLX3O60479 287 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 LRG1P02750 347 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 CYP1A1P04798 512 aaPredicted RBP6.46□□□□□ -1.38
CCDC66-221ENST00000487739 RSPO2Q6UXX9 243 aaPredicted RBP6.46□□□□□ -1.38
CCDC66-221ENST00000487739 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 TRIM48Q8IWZ4 208 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 GMLQ99445 158 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 AARSD1Q9BTE6 412 aaKnown RBP6.46□□□□□ -1.38
CCDC66-221ENST00000487739 PHF20Q9BVI0 1012 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 CDIP1Q9H305 208 aa6.46□□□□□ -1.38
CCDC66-221ENST00000487739 ADAM17P78536 824 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 SURF1Q15526 300 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 TTC9BQ8N6N2 239 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 LOXL4Q96JB6 756 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 SAMD11Q96NU1 681 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 TMEM168Q9H0V1 697 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 SLC6A20Q9NP91 592 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 ASH2LQ9UBL3 628 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 MYRFQ9Y2G1 1151 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 ZNF536O15090 1300 aa6.45□□□□□ -1.38
CCDC66-221ENST00000487739 KLF4O43474 513 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms