RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ABCC3O15438 1527 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 SH3D21A4FU49 640 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 RECKO95980 971 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 EPHX1P07099 455 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 SOX9P48436 509 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 POU4F1Q01851 419 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 TARBP2Q15633 366 aaKnown RBP6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 DPY19L1Q2PZI1 675 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 MBLAC2Q68D91 279 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 FERMT3Q86UX7 667 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 CPNE8Q86YQ8 564 aa6.16□□□□□ -1.42
SNRNP40-205ENST00000486941 TBC1D8O95759 1140 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 GIPRP48546 466 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 CYP4F3Q08477 520 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 ZFYVE27Q5T4F4 411 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 B3GNT8Q7Z7M8 397 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 ARHGEF39Q8N4T4 335 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 RNF34Q969K3 372 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 BDH2Q9BUT1 245 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 WHRNQ9P202 907 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 GULP1Q9UBP9 304 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 EFR3BQ9Y2G0 817 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 SIT1Q9Y3P8 196 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 PMF1-BGLAPU3KQ54 211 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 UBR1Q8IWV7 1749 aa6.15□□□□□ -1.42
SNRNP40-205ENST00000486941 STRCP1A6NGW2 1772 aa6.15□□□□□ -1.43
SNRNP40-205ENST00000486941 MYOM3Q5VTT5 1437 aa6.15□□□□□ -1.43
SNRNP40-205ENST00000486941 ERVK-7P63135 1459 aa6.15□□□□□ -1.43
SNRNP40-205ENST00000486941 DUOX2Q9NRD8 1548 aa6.15□□□□□ -1.43
SNRNP40-205ENST00000486941 MED1Q15648 1581 aaPredicted RBP6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 MROH1Q8NDA8 1641 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 ALKQ9UM73 1620 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 CEP152O94986 1710 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 NOBOXO60393 691 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 NCAM1P13591 858 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 TCEAL1Q15170 157 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 GNPTABQ3T906 1256 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 NT5DC1Q5TFE4 455 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 DPF3Q92784 378 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 TSPAN17Q96FV3 270 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 RNF38Q9H0F5 515 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 CGGBP1Q9UFW8 167 aaPredicted RBP6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 ARHGAP31Q2M1Z3 1444 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 LRRC7Q96NW7 1537 aa6.14□□□□□ -1.43
SNRNP40-205ENST00000486941 A0A1W2PQJ5 194 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 LOC105371045A0A1W2PR82 267 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 ADRB1P08588 477 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 EEF1DP3Q658K8 133 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 NLGN1Q8N2Q7 840 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 FAM169BQ8N8A8 192 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 ALG3Q92685 438 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 SHDQ96IW2 340 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 APEX2Q9UBZ4 518 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 SCAF11Q99590 1463 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 ARHGAP23Q9P227 1491 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 SLIT1O75093 1534 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 SYNMO15061 1565 aa6.13□□□□□ -1.43
SNRNP40-205ENST00000486941 C7orf72A4D263 438 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 C2orf71A6NGG8 1288 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 ARNTLO00327 626 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 PLP2Q04941 152 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 DBX2Q6ZNG2 339 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 CARFQ8N187 725 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 LZTR1Q8N653 840 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 SMARCC2Q8TAQ2 1214 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 ERBINQ96RT1 1412 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 LGR4Q9BXB1 951 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 KIF15Q9NS87 1388 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 EID1Q9Y6B2 187 aa6.12□□□□□ -1.43
SNRNP40-205ENST00000486941 XIRP1Q702N8 1843 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 CROCC2H7BZ55 1655 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 KDM5AP29375 1690 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 PRDM15P57071 1507 aaPredicted RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 ABCC5O15440 1437 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 SLC7A5Q01650 507 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 HEATR6Q6AI08 1181 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 HHIPL2Q6UWX4 724 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 PLEKHO2Q8TD55 490 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 RASGRP4Q8TDF6 673 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 CPA5Q8WXQ8 436 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 DDX1Q92499 740 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 RCC1LQ96I51 464 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 GPRC5CQ9NQ84 441 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 RRP7BPQ9NSQ0 103 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 DBR1Q9UK59 544 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 BACE2Q9Y5Z0 518 aa6.11□□□□□ -1.43
SNRNP40-205ENST00000486941 PTPN23Q9H3S7 1636 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 KANK1Q14678 1352 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 TMEM2Q9UHN6 1383 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 C8BP07358 591 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 EIF6P56537 245 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 C9orf131Q5VYM1 1079 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 ZNF654Q8IZM8 581 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 FAM26EQ8N5C1 309 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 C19orf47Q8N9M1 422 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 COPS5Q92905 334 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 RBM15Q96T37 977 aaKnown RBP eCLIP6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 LNPKQ9C0E8 428 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 PHAXQ9H814 394 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms