RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 ALADP13716 330 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 KLRC1P26715 233 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 STAT6P42226 847 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PIK3AP1Q6ZUJ8 805 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 DNAAF5Q86Y56 855 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 NBPF15Q8N660 670 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 CNKSR1Q969H4 720 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ERGIC2Q96RQ1 377 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ELAC2Q9BQ52 826 aaKnown RBP10.81□□□□□ -0.68
COL13A1-207ENST00000478219 AP1M1Q9BXS5 423 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PACSIN1Q9BY11 444 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 HOMER3Q9NSC5 361 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 TRIM33Q9UPN9 1127 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ADAMTS7Q9UKP4 1686 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 NID2Q14112 1375 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ZNF142P52746 1687 aaPredicted RBP10.81□□□□□ -0.68
COL13A1-207ENST00000478219 CHD4Q14839 1912 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 A0A1W2PQJ5 194 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 TCRBV5S4A2TA0A5A2 114 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 UBOX5O94941 541 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PYGLP06737 847 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 KRT16P08779 473 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 RARAP10276 462 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 FCER1AP12319 257 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 CHN1P15882 459 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PDE6AP16499 860 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 TATP17735 454 aaPredicted RBP10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ATP4AP20648 1035 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 NCALDP61601 193 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 FUT2Q10981 343 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 STK4Q13043 487 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PSMD2Q13200 908 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 BIRC3Q13489 604 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ANKRD20A2Q5SQ80 823 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ANKRD20A1Q5TYW2 823 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ANKRD20A3Q5VUR7 823 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PIGWQ7Z7B1 504 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 TAX1BP1Q86VP1 789 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 USP38Q8NB14 1042 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 GIMAP8Q8ND71 665 aaPredicted RBP10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ZNF526Q8TF50 670 aaPredicted RBP10.81□□□□□ -0.68
COL13A1-207ENST00000478219 FAM129AQ9BZQ8 928 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 ZBTB3Q9H5J0 574 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 MMRN2Q9H8L6 949 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 CWC25Q9NXE8 425 aaPredicted RBP10.81□□□□□ -0.68
COL13A1-207ENST00000478219 AXIN2Q9Y2T1 843 aa10.81□□□□□ -0.68
COL13A1-207ENST00000478219 PSMA7O14818 248 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 SART1O43290 800 aaKnown RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 DAPK3O43293 454 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 EVI5O60447 810 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 NQO1P15559 274 aaKnown RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 UBAP2Q5T6F2 1119 aaKnown RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 HGSNATQ68CP4 663 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 ZSCAN29Q8IWY8 852 aaPredicted RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 BAP1Q92560 729 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 P3H4Q92791 437 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 DDX47Q9H0S4 455 aaKnown RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 NAPBQ9H115 298 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 ADAM7Q9H2U9 754 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 TMEM59LQ9UK28 342 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 CLSTN1O94985 981 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 MBD4O95243 580 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 PCCAP05165 728 aaPredicted RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 FESP07332 822 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 GNAT1P11488 350 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 SLC5A9Q2M3M2 681 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 AGBL2Q5U5Z8 902 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 MFSD6Q6ZSS7 791 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 TRPM8Q7Z2W7 1104 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 ATXN2LQ8WWM7 1075 aaKnown RBP10.8□□□□□ -0.68
COL13A1-207ENST00000478219 ITFG2Q969R8 447 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 PSMD1Q99460 953 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 CAMTA1Q9Y6Y1 1673 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 TJP1Q07157 1748 aa10.8□□□□□ -0.68
COL13A1-207ENST00000478219 MMEP08473 750 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 SNRPA1P09661 255 aaKnown RBP10.79□□□□□ -0.68
COL13A1-207ENST00000478219 ITGA4P13612 1032 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
COL13A1-207ENST00000478219 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 MEI1Q5TIA1 1274 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 RUFY4Q6ZNE9 571 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 ARMC9Q7Z3E5 817 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 P2RX5Q93086 422 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 OSBPL1AQ9BXW6 950 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 RNF26Q9BY78 433 aaPredicted RBP10.79□□□□□ -0.68
COL13A1-207ENST00000478219 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 STK38LQ9Y2H1 464 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
COL13A1-207ENST00000478219 CD2APQ9Y5K6 639 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 AFF2P51816 1311 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 GSG1L2A8MUP6 293 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 TLR2O60603 784 aa10.79□□□□□ -0.68
COL13A1-207ENST00000478219 TRAF1Q13077 416 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms