RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 MED24O75448 989 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 PLA2G4BP0C869 781 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 UBXN1Q04323 297 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 LPAR1Q92633 364 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 PANX2Q96RD6 677 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
RPUSD3-215ENST00000475470 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 RRP9O43818 475 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 KIAA1683Q9H0B3 1180 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 NBPF12Q5TAG4 269 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 CATSPER3Q86XQ3 398 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 DNAJC19Q96DA6 116 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 ZNF541Q9H0D2 1346 aa17.13■□□□□ 0.33
RPUSD3-215ENST00000475470 RIOK3O14730 519 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 ICAM1P05362 532 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 CASP14P31944 242 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 CNGA4Q8IV77 575 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 IGLV3-22A0A075B6J6 115 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 POTEFA5A3E0 1075 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 LGALS16A8MUM7 142 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 ZSCAN12O43309 604 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 MFAP3LO75121 409 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 POTEIP0CG38 1075 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 RPA1P27694 616 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 EHHADHQ08426 723 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 COASYQ13057 564 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 POTEEQ6S8J3 1075 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 GPBP1Q86WP2 473 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 EEF2KMTQ96G04 330 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
RPUSD3-215ENST00000475470 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 GYPCP04921 128 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 TRIM14Q14142 442 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 UBE2Q2Q8WVN8 375 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 TANGO6Q9C0B7 1094 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 VAV3Q9UKW4 847 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 UBXN2AP68543 259 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 RBM10P98175 930 aaKnown RBP17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 MB21D1Q8N884 522 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 CNOT6LQ96LI5 555 aaKnown RBP17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 NAA15Q9BXJ9 866 aaKnown RBP17.11■□□□□ 0.33
RPUSD3-215ENST00000475470 MTIF2P46199 727 aaKnown RBP17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 KIF18AQ8NI77 898 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 MEIS1O00470 390 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 SPATA31C1P0DKV0 1188 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 CYP11B2P19099 503 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 DGKZQ13574 1117 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 MTMR2Q13614 643 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 LRRC41Q15345 812 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 FAM26FQ5R3K3 315 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 WDR18Q9BV38 432 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 PPP2R2CQ9Y2T4 447 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 ZNF536O15090 1300 aa17.1■□□□□ 0.33
RPUSD3-215ENST00000475470 FLOT1O75955 427 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 TUBB4AP04350 444 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 DNM2P50570 870 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 LRRC63Q05C16 580 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 APOBEC3FQ8IUX4 373 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 TSG101Q99816 390 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 A0A1W2PQC6 194 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 B4DLN1 442 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 USP14P54578 494 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 CEP55Q53EZ4 464 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 ZNF507Q8TCN5 953 aa17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
RPUSD3-215ENST00000475470 VCAM1P19320 739 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms