RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 TNIP1Q15025 636 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 USP50Q70EL3 339 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-208ENST00000470994 C3orf58Q8NDZ4 430 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 GPR101Q96P66 508 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-208ENST00000470994 BABAM1Q9NWV8 329 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 CHPF2Q9P2E5 772 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 AFDNP55196 1824 aaKnown RBP7.49□□□□□ -1.21
GPNMB-208ENST00000470994 NRXN2Q9P2S2 1712 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 ABCC4O15439 1325 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 SH3TC1Q8TE82 1336 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 SLX4Q8IY92 1834 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 RASSF10A6NK89 507 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 H7C1D1 291 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 CHL1O00533 1208 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 CELF2O95319 508 aaKnown RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 HPXP02790 462 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 BRCA1P38398 1863 aaKnown RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 ECE1P42892 770 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 HK2P52789 917 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 ETF1P62495 437 aaKnown RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 GRAPQ13588 217 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 CYP4F22Q6NT55 531 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 LRP10Q7Z4F1 713 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 HID1Q8IV36 788 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 GRAPLQ8TC17 118 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 RUNDC1Q96C34 613 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 FAM89AQ96GI7 184 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 CAPNS2Q96L46 248 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 GLIS2Q9BZE0 524 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 IRF2BPLQ9H1B7 796 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 KCNK12Q9HB15 430 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 PARD6AQ9NPB6 346 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 ADARB2Q9NS39 739 aaKnown RBP7.48□□□□□ -1.21
GPNMB-208ENST00000470994 GPRC5DQ9NZD1 345 aa7.48□□□□□ -1.21
GPNMB-208ENST00000470994 WDR90Q96KV7 1748 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 SLBPQ14493 270 aaKnown RBP eCLIP7.47□□□□□ -1.21
GPNMB-208ENST00000470994 CST9Q5W186 159 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 USP48Q86UV5 1035 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 PLBD2Q8NHP8 589 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 PIWIL2Q8TC59 973 aaKnown RBP7.47□□□□□ -1.21
GPNMB-208ENST00000470994 WNT10AQ9GZT5 417 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 VPS33BQ9H267 617 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 ZCCHC4Q9H5U6 513 aa7.47□□□□□ -1.21
GPNMB-208ENST00000470994 CNOT7Q9UIV1 285 aaKnown RBP7.47□□□□□ -1.21
GPNMB-208ENST00000470994 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
GPNMB-208ENST00000470994 MYBBP1AQ9BQG0 1328 aaKnown RBP7.47□□□□□ -1.21
GPNMB-208ENST00000470994 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-208ENST00000470994 UBR2Q8IWV8 1755 aa7.46□□□□□ -1.21
GPNMB-208ENST00000470994 PNMA6FA0A0J9YX94 578 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 IRS4O14654 1257 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-208ENST00000470994 PAGE1O75459 146 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 HSPA8P11142 646 aaKnown RBP7.46□□□□□ -1.22
GPNMB-208ENST00000470994 KIAA2012Q0VF49 1180 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 IRF2BP1Q8IU81 584 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 JARID2Q92833 1246 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-208ENST00000470994 CELF1Q92879 486 aaKnown RBP7.46□□□□□ -1.22
GPNMB-208ENST00000470994 RTFDC1Q9BY42 306 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-208ENST00000470994 SLC6A17Q9H1V8 727 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 DBNDD1Q9H9R9 158 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 FBRSQ9HAH7 460 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 HYPKQ9NX55 129 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 DBF4Q9UBU7 674 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-208ENST00000470994 SBF1O95248 1867 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 CEP350Q5VT06 3117 aa7.46□□□□□ -1.22
GPNMB-208ENST00000470994 SHTN1A0MZ66 631 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 SEMA7AO75326 666 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 RPS8P62241 208 aaKnown RBP7.45□□□□□ -1.22
GPNMB-208ENST00000470994 GPSM2P81274 684 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-208ENST00000470994 RALGPS1Q5JS13 557 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 TMC4Q7Z404 712 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 LILRA2Q8N149 483 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 PLPPR2Q96GM1 343 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 EYA3Q99504 573 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 TRIT1Q9H3H1 467 aaKnown RBP7.45□□□□□ -1.22
GPNMB-208ENST00000470994 SNCAIPQ9Y6H5 919 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 ANKRD31Q8N7Z5 1873 aa7.45□□□□□ -1.22
GPNMB-208ENST00000470994 SCN7AQ01118 1682 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 YDJCA8MPS7 323 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 PSMD14O00487 310 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 APAF1O14727 1248 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 FBXO24O75426 580 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 CST3P01034 146 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-208ENST00000470994 INPP5AQ14642 412 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 SF3B3Q15393 1217 aaKnown RBP7.44□□□□□ -1.22
GPNMB-208ENST00000470994 NKG7Q16617 165 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 PCNX4Q63HM2 1172 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 DLK2Q6UY11 383 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 TMC7Q7Z402 723 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 CREG2Q8IUH2 290 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 OXR1Q8N573 874 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 FBF1Q8TES7 1133 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 DCPSQ96C86 337 aaKnown RBP7.44□□□□□ -1.22
GPNMB-208ENST00000470994 ABHD8Q96I13 439 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 MYD88Q99836 296 aa7.44□□□□□ -1.22
GPNMB-208ENST00000470994 ISCA1Q9BUE6 129 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms