RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 FCER1AP12319 257 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 RBL2Q08999 1139 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 TRIM14Q14142 442 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 ANKRD40Q6AI12 368 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 CENPPQ6IPU0 288 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 SULF1Q8IWU6 871 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 CSGALNACT2Q8N6G5 542 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 ERMNQ8TAM6 284 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 LPAR1Q92633 364 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 DDX12PQ92771 950 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 GJA10Q969M2 543 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 KIFC2Q96AC6 838 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 WRNIP1Q96S55 665 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 ZNF112Q9UJU3 913 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 RIOK3O14730 519 aaKnown RBP18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 ZNF76P36508 570 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 USP14P54578 494 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 DYMQ7RTS9 669 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 GUF1Q8N442 669 aaKnown RBP18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 KIAA0895Q8NCT3 520 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 LENG9Q96B70 501 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 L3MBTL3Q96JM7 780 aaPredicted RBP18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 ABCB11O95342 1321 aa18.89■□□□□ 0.61
SMARCD3-206ENST00000470588 WDR46O15213 610 aaKnown RBP18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 INPP5BP32019 993 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 EHHADHQ08426 723 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 HAUS3Q68CZ6 603 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 CCDC174Q6PII3 467 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 FOXR2Q6PJQ5 311 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 USP50Q70EL3 339 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 CREBRFQ8IUR6 639 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 CNGA4Q8IV77 575 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 KIF18AQ8NI77 898 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 KIAA1683Q9H0B3 1180 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 SLC39A2Q9NP94 309 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 KIAA1024Q9UPX6 916 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 POLR2AP24928 1970 aaKnown RBP18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 A0A1W2PQC6 194 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 LGALS16A8MUM7 142 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 FGFR1OPO95684 399 aaKnown RBP18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 FAM86B2P0C5J1 330 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 PLA2G4BP0C869 781 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 UBXN1Q04323 297 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 KCTD17Q8N5Z5 321 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 DNAJC19Q96DA6 116 aa18.88■□□□□ 0.61
SMARCD3-206ENST00000470588 GOLGA6L9A6NEM1 432 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 CFBP00751 764 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 IDEP14735 1019 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 SPIRE1Q08AE8 756 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 PRAMEF18Q5VWM3 479 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 CCDC84Q86UT8 332 aaPredicted RBP18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 REXO1L1PQ8IX06 675 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 MB21D1Q8N884 522 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 SEMA6BQ9H3T3 888 aa18.87■□□□□ 0.61
SMARCD3-206ENST00000470588 MSH4O15457 936 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 MFAP3LO75121 409 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 RPA1P27694 616 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 DNM2P50570 870 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 LDHDQ86WU2 507 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 CCDC65Q8IXS2 484 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 ZNF507Q8TCN5 953 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 CPLX3Q8WVH0 158 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 ZNF592Q92610 1267 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 WDR18Q9BV38 432 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 GLIS2Q9BZE0 524 aaPredicted RBP18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 SCN4AP35499 1836 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 E9PMD0 336 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 MED24O75448 989 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 FECHP22830 423 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 STAT3P40763 770 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 TBC1D5Q92609 795 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 PANK4Q9NVE7 773 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 PPP2R2CQ9Y2T4 447 aa18.86■□□□□ 0.61
SMARCD3-206ENST00000470588 POTEB3A0JP26 581 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 POTECB2RU33 542 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 GYPCP04921 128 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 CASP14P31944 242 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 EPHX2P34913 555 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 NF2P35240 595 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 LRRC63Q05C16 580 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 NOL9Q5SY16 702 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 NCAPH2Q6IBW4 605 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 POTEBQ6S5H4 581 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 PRPF38AQ8NAV1 312 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 HPS3Q969F9 1004 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 KLRG1Q96E93 195 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 TUBGCP2Q9BSJ2 902 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 POLR3CQ9BUI4 534 aaPredicted RBP18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 FBXO28Q9NVF7 368 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 DNM3Q9UQ16 869 aa18.85■□□□□ 0.61
SMARCD3-206ENST00000470588 IGLV3-22A0A075B6J6 115 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms