RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
HMGXB4-206ENST00000466438 GH1P01241 217 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 IFIT2P09913 472 aaKnown RBP17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 ICAM3P32942 547 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 BMPR1AP36894 532 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 PSEN2P49810 448 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 RRP1P56182 461 aaKnown RBP17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 ARHGAP1Q07960 439 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 ZSCAN25Q6NSZ9 544 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 CCDC62Q6P9F0 684 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 FIBCD1Q8N539 461 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 DNERQ8NFT8 737 aa17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
HMGXB4-206ENST00000466438 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 B4DLN1 442 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 MMP1P03956 469 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 LINC00271P0C7V0 271 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 COASYQ13057 564 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 DGKDQ16760 1214 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 ADSSL1Q8N142 457 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 SEPT8Q92599 483 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 PPP2R3CQ969Q6 453 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 IL17RAQ96F46 866 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 PHF7Q9BWX1 381 aaPredicted RBP17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 INCENPQ9NQS7 918 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 CLEC1BQ9P126 229 aa17.39■□□□□ 0.37
HMGXB4-206ENST00000466438 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 MED19A0JLT2 244 aaPredicted RBP17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 KRT37O76014 449 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 F2P00734 622 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 MFSD10Q14728 455 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 PTPN21Q16825 1174 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 KIAA0753Q2KHM9 967 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 MCTP2Q6DN12 878 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 RIPOR3Q96MK2 946 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 HAUS7Q99871 368 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 USP15Q9Y4E8 981 aaPredicted RBP17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 EPG5Q9HCE0 2579 aa17.38■□□□□ 0.37
HMGXB4-206ENST00000466438 HAS3O00219 553 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 RGS20O76081 388 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 PDGFBP01127 241 aaPredicted RBP17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 ATP5JP18859 108 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 THPOP40225 353 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 RPS6P62753 249 aaKnown RBP17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 ZNF200P98182 395 aaPredicted RBP17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 PPP4R3BQ5MIZ7 849 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 EFHBQ8N7U6 833 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 CLEC4DQ8WXI8 215 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 RPGRIP1Q96KN7 1286 aa17.37■□□□□ 0.37
HMGXB4-206ENST00000466438 CSPG5O95196 566 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 TDO2P48775 406 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 TFAP4Q01664 338 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 LY6KQ17RY6 165 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 ZKSCAN2Q63HK3 967 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 RASGRP2Q7LDG7 609 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 FRMD5Q7Z6J6 570 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 SERINC5Q86VE9 423 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 DHX37Q8IY37 1157 aaKnown RBP17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 CLP1Q92989 425 aaKnown RBP17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 KMT2BQ9UMN6 2715 aaPredicted RBP17.36■□□□□ 0.37
HMGXB4-206ENST00000466438 ZNF286BP0CG31 522 aa17.35■□□□□ 0.37
HMGXB4-206ENST00000466438 CAMK1Q14012 370 aa17.35■□□□□ 0.37
HMGXB4-206ENST00000466438 EMID1Q96A84 441 aaPredicted RBP17.35■□□□□ 0.37
HMGXB4-206ENST00000466438 PNMA2Q9UL42 364 aa17.35■□□□□ 0.37
HMGXB4-206ENST00000466438 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
HMGXB4-206ENST00000466438 ADGRA3Q8IWK6 1321 aa17.35■□□□□ 0.37
HMGXB4-206ENST00000466438 DMXL1Q9Y485 3027 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 ATF7P17544 494 aaPredicted RBP17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 HIC1Q14526 733 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 CCDC96Q2M329 555 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 APBB2Q92870 758 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 PLVAPQ9BX97 442 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 DNAH14Q0VDD8 3507 aa17.34■□□□□ 0.37
HMGXB4-206ENST00000466438 ZNF292O60281 2723 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 SLC16A2P36021 539 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 DGLUCYQ7Z3D6 616 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 ADGRD2Q7Z7M1 963 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 ITPRIPQ8IWB1 547 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 TMEM105Q8N8V8 129 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 PPTC7Q8NI37 304 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 DCAF4Q8WV16 495 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 RC3H2Q9HBD1 1191 aaKnown RBP17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 BARX2Q9UMQ3 279 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms