RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 PBX1P40424 430 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 CTCFP49711 727 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 USP14P54578 494 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 KCNB1Q14721 858 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 REXO1Q8N1G1 1221 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 IGSF22Q8N9C0 903 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 NELFBQ8WX92 580 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 ZFYVE28Q9HCC9 887 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 VAT1LQ9HCJ6 419 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 LIMA1Q9UHB6 759 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 ZNF215Q9UL58 517 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-203ENST00000464451 LOC285556D6RIA3 1793 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 SNHG28P0DPA3 235 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 SMCR8Q8TEV9 937 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 NAA15Q9BXJ9 866 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 ASCC2Q9H1I8 757 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 SH2D4AQ9H788 454 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 ITIH6Q6UXX5 1313 aa13.56□□□□□ -0.24
SEC61A1-203ENST00000464451 PP2D1A8MPX8 630 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 F5H6K3 240 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 KLRC3Q07444 240 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 P2RX7Q99572 595 aaKnown RBP13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 GPR25O00155 361 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 OSBPP22059 807 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 PRCPP42785 496 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 RBL2Q08999 1139 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 STIM1Q13586 685 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 KRT31Q15323 416 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 FAM83BQ5T0W9 1011 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 CABP7Q86V35 215 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 TBCKQ8TEA7 893 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 ZNF296Q8WUU4 475 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 PARK7Q99497 189 aaKnown RBP13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 UBA5Q9GZZ9 404 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 GOPCQ9HD26 462 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.55□□□□□ -0.24
SEC61A1-203ENST00000464451 N4BP3O15049 544 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 TLR2O60603 784 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 RHOBTB3O94955 611 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 NDUFB10O96000 172 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 TPM1P09493 284 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 PABPC4Q13310 644 aaKnown RBP eCLIP13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 TCP11X2Q5H9J9 407 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 CNGA4Q8IV77 575 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 MKL1Q969V6 931 aa13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 FRMPD2Q68DX3 1309 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-203ENST00000464451 KCNJ18B7U540 433 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 HOXA7P31268 230 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 ADCY7P51828 1080 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 KCNJ12Q14500 433 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 SLFN13Q68D06 897 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 CATSPERGQ6ZRH7 1159 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 TOGARAM2Q6ZUX3 1019 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 GIMAP8Q8ND71 665 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 CCDC47Q96A33 483 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 ZCCHC17Q9NP64 241 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 BIN2Q9UBW5 565 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 PSMA7O14818 248 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 KLRC4O43908 158 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 MFAP3LO75121 409 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 PLCG1P19174 1290 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 AMPD3Q01432 767 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
SEC61A1-203ENST00000464451 TRIM14Q14142 442 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms