RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CKBP12277 381 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 HAND2P61296 217 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 RBL2Q08999 1139 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 GPNMBQ14956 572 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 STXBP2Q15833 593 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 DGKDQ16760 1214 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 DHX38Q92620 1227 aaKnown RBP16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 KAT2BQ92831 832 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 TGS1Q96RS0 853 aaKnown RBP16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 IWS1Q96ST2 819 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 RAD9AQ99638 391 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 KATNAL1Q9BW62 490 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 MTUS1Q9ULD2 1270 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 ABCB11O95342 1321 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 SIP14410 1827 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 A0A0D9SFI3 127 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 GPR37L1O60883 481 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 NBNO60934 754 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 EFCAB14O75071 495 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 GJB5O95377 273 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 IKBKEQ14164 716 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 CDC37Q16543 378 aaPredicted RBP16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 MCF2L2Q86YR7 1114 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 TAAR1Q96RJ0 339 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 UBA5Q9GZZ9 404 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 SUGCTQ9HAC7 445 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 HDAC6Q9UBN7 1215 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 MYH6P13533 1939 aa16.78■□□□□ 0.28
UPF3AP2-201ENST00000457924 MYH7BA7E2Y1 1941 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 ST18O60284 1047 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 ERVK-21P61565 698 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 LCE2DQ5TA82 110 aaPredicted RBP16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 TICAM2Q86XR7 235 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 TBC1D5Q92609 795 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 ESR2Q92731 530 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 RMDN3Q96TC7 470 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 ALG1Q9BT22 464 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 BRWD1Q9NSI6 2320 aa16.77■□□□□ 0.28
UPF3AP2-201ENST00000457924 LINC01553A4QN01 128 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 PSEN2P49810 448 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 PTK7Q13308 1070 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 ARHGEF16Q5VV41 709 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 FAM117BQ6P1L5 589 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 KCNV2Q8TDN2 545 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 KHSRPQ92945 711 aaKnown RBP eCLIP16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 UBE2ZQ9H832 354 aaPredicted RBP16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 COL20A1Q9P218 1284 aa16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 DDX41Q9UJV9 622 aaKnown RBP16.76■□□□□ 0.27
UPF3AP2-201ENST00000457924 CCDC171Q6TFL3 1326 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 FAM86C2PA6NEL3 165 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 EIF3JO75822 258 aaKnown RBP16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 PDE1AP54750 535 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 LAMC2Q13753 1193 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 KIAA0753Q2KHM9 967 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 CCDC178Q5BJE1 867 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 TBC1D10CQ8IV04 446 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 ADGRF4Q8IZF3 695 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 PNMA1Q8ND90 353 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 PPTC7Q8NI37 304 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 EMID1Q96A84 441 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 C11orf16Q9NQ32 467 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 MRVI1Q9Y6F6 885 aa16.75■□□□□ 0.27
UPF3AP2-201ENST00000457924 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 F2P00734 622 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 ZNF286BP0CG31 522 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 EIF2AK2P19525 551 aaKnown RBP16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 NT5C2P49902 561 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 ARSIQ5FYB1 569 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 ZNF618Q5T7W0 954 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 IQCA1Q86XH1 822 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 DHX37Q8IY37 1157 aaKnown RBP16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 CD320Q9NPF0 282 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 INSL6Q9Y581 213 aa16.74■□□□□ 0.27
UPF3AP2-201ENST00000457924 NEDD4P46934 1319 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 HAS3O00219 553 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 ZNF213O14771 459 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 LGR5O75473 907 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 AMHP03971 560 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 NR3C2P08235 984 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 KCNA5P22460 613 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms