RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TPH2Q8IWU9 490 aa15.21■□□□□ 0.03
CLK3-203ENST00000454830 EHMT1Q9H9B1 1298 aa15.21■□□□□ 0.03
CLK3-203ENST00000454830 TRAF5O00463 557 aa15.21■□□□□ 0.03
CLK3-203ENST00000454830 STX10O60499 249 aa15.21■□□□□ 0.03
CLK3-203ENST00000454830 APTXQ7Z2E3 356 aaKnown RBP15.21■□□□□ 0.03
CLK3-203ENST00000454830 FAM160B2Q86V87 743 aa15.21■□□□□ 0.03
CLK3-203ENST00000454830 GLIS3Q8NEA6 775 aa15.21■□□□□ 0.03
CLK3-203ENST00000454830 KIF2AO00139 706 aaPredicted RBP15.21■□□□□ 0.02
CLK3-203ENST00000454830 SPP2Q13103 211 aa15.21■□□□□ 0.02
CLK3-203ENST00000454830 TBX2Q13207 712 aaPredicted RBP15.21■□□□□ 0.02
CLK3-203ENST00000454830 FKBP15Q5T1M5 1219 aa15.21■□□□□ 0.02
CLK3-203ENST00000454830 MCTP2Q6DN12 878 aa15.21■□□□□ 0.02
CLK3-203ENST00000454830 TTI2Q6NXR4 508 aa15.21■□□□□ 0.02
CLK3-203ENST00000454830 BTNL9Q6UXG8 535 aa15.21■□□□□ 0.02
CLK3-203ENST00000454830 RAVER2Q9HCJ3 691 aaKnown RBP15.21■□□□□ 0.02
CLK3-203ENST00000454830 RGL1Q9NZL6 768 aa15.21■□□□□ 0.02
CLK3-203ENST00000454830 MSH4O15457 936 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
CLK3-203ENST00000454830 SREBF1P36956 1147 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 CCDC40Q4G0X9 1142 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 LRCH2Q5VUJ6 765 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 FEM1BQ9UK73 627 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 EEF1GP26641 437 aaKnown RBP15.2■□□□□ 0.02
CLK3-203ENST00000454830 COASYQ13057 564 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 MTMR2Q13614 643 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 CTTNQ14247 550 aaKnown RBP15.2■□□□□ 0.02
CLK3-203ENST00000454830 NSMFQ6X4W1 530 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 MYOCDQ8IZQ8 938 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 GAS7O60861 476 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 MFAP3LO75121 409 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 GYPCP04921 128 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 NLGN2Q8NFZ4 835 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 TCEAL9Q9UHQ7 104 aa15.2■□□□□ 0.02
CLK3-203ENST00000454830 LUC7L2Q9Y383 392 aaKnown RBP15.2■□□□□ 0.02
CLK3-203ENST00000454830 MYH7BA7E2Y1 1941 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 PVALEFA0A1B0GWK0 134 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 ANGEL2Q5VTE6 544 aaKnown RBP15.19■□□□□ 0.02
CLK3-203ENST00000454830 CATSPER3Q86XQ3 398 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 PICK1Q9NRD5 415 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 SAMM50Q9Y512 469 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 ABCB11O95342 1321 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 SMCHD1A6NHR9 2005 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 OPLAHO14841 1288 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 CCDC175P0C221 793 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 PPP1R2P41236 205 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 PSMC6P62333 389 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 SYCP1Q15431 976 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
CLK3-203ENST00000454830 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
CLK3-203ENST00000454830 WRNIP1Q96S55 665 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 DUSP9Q99956 384 aaKnown RBP15.19■□□□□ 0.02
CLK3-203ENST00000454830 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 MB21D1Q8N884 522 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 MTMR14Q8NCE2 650 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 SLF1Q9BQI6 1058 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
CLK3-203ENST00000454830 TBC1D12O60347 775 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 ARHGAP29Q52LW3 1261 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 LGALS16A8MUM7 142 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 TBCAO75347 108 aaKnown RBP15.18■□□□□ 0.02
CLK3-203ENST00000454830 FGFR1OPO95684 399 aaKnown RBP15.18■□□□□ 0.02
CLK3-203ENST00000454830 MYCLP12524 364 aaPredicted RBP15.18■□□□□ 0.02
CLK3-203ENST00000454830 PRPF38AQ8NAV1 312 aaKnown RBP15.18■□□□□ 0.02
CLK3-203ENST00000454830 FAM20AQ96MK3 541 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
CLK3-203ENST00000454830 ZNF577Q9BSK1 485 aa15.18■□□□□ 0.02
CLK3-203ENST00000454830 GTPBP4Q9BZE4 634 aaKnown RBP15.18■□□□□ 0.02
CLK3-203ENST00000454830 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 SFI1A8K8P3 1242 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 RPS12P25398 132 aaKnown RBP15.17■□□□□ 0.02
CLK3-203ENST00000454830 DNM2P50570 870 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 NAA30Q147X3 362 aaPredicted RBP15.17■□□□□ 0.02
CLK3-203ENST00000454830 ZNHIT6Q9NWK9 470 aaKnown RBP15.17■□□□□ 0.02
CLK3-203ENST00000454830 NFIBO00712 420 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 EPS15P42566 896 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 ETF1P62495 437 aaKnown RBP15.17■□□□□ 0.02
CLK3-203ENST00000454830 ETNPPLQ8TBG4 499 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 CCDC43Q96MW1 224 aaKnown RBP15.17■□□□□ 0.02
CLK3-203ENST00000454830 PANX2Q96RD6 677 aa15.17■□□□□ 0.02
CLK3-203ENST00000454830 FAM207AQ9NSI2 230 aaPredicted RBP15.17■□□□□ 0.02
CLK3-203ENST00000454830 KLK7P49862 253 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 PLS1Q14651 629 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 MAEAQ7L5Y9 396 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 EIF2AK1Q9BQI3 630 aaKnown RBP15.16■□□□□ 0.02
CLK3-203ENST00000454830 RANBP17Q9H2T7 1088 aaKnown RBP15.16■□□□□ 0.02
CLK3-203ENST00000454830 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 TTC26A0AVF1 554 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 EIF2AK2P19525 551 aaKnown RBP15.16■□□□□ 0.02
CLK3-203ENST00000454830 CYP3A7P24462 503 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 RAD9BQ6WBX8 426 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 TMEM139Q8IV31 216 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms