RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 IGSF22Q8N9C0 903 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 MAP7D2Q96T17 732 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 NAA15Q9BXJ9 866 aaKnown RBP10.25□□□□□ -0.77
HDAC6-209ENST00000440653 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 JMJD4Q9H9V9 463 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 KBTBD4Q9NVX7 518 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 FAM198AQ9UFP1 575 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 MYPNQ86TC9 1320 aa10.25□□□□□ -0.77
HDAC6-209ENST00000440653 DOCK1Q14185 1865 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 BICDL2A1A5D9 508 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 RHOBTB3O94955 611 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 SLC1A4P43007 532 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
HDAC6-209ENST00000440653 SEPT2Q15019 361 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 KARSQ15046 597 aaKnown RBP10.24□□□□□ -0.77
HDAC6-209ENST00000440653 IL17AQ16552 155 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ABCB5Q2M3G0 1257 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ISM2Q6H9L7 571 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ARMCX5Q6P1M9 558 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 FOXR2Q6PJQ5 311 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 NYAP1Q6ZVC0 841 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 RASGRP2Q7LDG7 609 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ZSCAN29Q8IWY8 852 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ANKRD13AQ8IZ07 590 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ADGRF4Q8IZF3 695 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 CCAR2Q8N163 923 aaKnown RBP10.24□□□□□ -0.77
HDAC6-209ENST00000440653 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 CCDC51Q96ER9 411 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ZBED3Q96IU2 234 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-209ENST00000440653 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 TMEM60Q9H2L4 133 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 TTYH1Q9H313 450 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-209ENST00000440653 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 CPA4Q9UI42 421 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 GABRQQ9UN88 632 aa10.24□□□□□ -0.77
HDAC6-209ENST00000440653 OTOFQ9HC10 1997 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 ZSCAN12O43309 604 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 FOSL2P15408 326 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 PLCG1P19174 1290 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 EEF1GP26641 437 aaKnown RBP10.23□□□□□ -0.77
HDAC6-209ENST00000440653 IREB2P48200 963 aaKnown RBP10.23□□□□□ -0.77
HDAC6-209ENST00000440653 TNNI2P48788 182 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 PRKCZQ05513 592 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 PDIA5Q14554 519 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 SYCP1Q15431 976 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 CDC37Q16543 378 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-209ENST00000440653 SLFN13Q68D06 897 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 CNNM4Q6P4Q7 775 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 C17orf99Q6UX52 265 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 CNGA4Q8IV77 575 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 FAM114A1Q8IWE2 563 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 TRMT44Q8IYL2 757 aaKnown RBP10.23□□□□□ -0.77
HDAC6-209ENST00000440653 OGFOD1Q8N543 542 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 IQCDQ96DY2 449 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 C16orf45Q96MC5 204 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-209ENST00000440653 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 EXOC1Q9NV70 894 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-209ENST00000440653 PCDHAC2Q9Y5I4 1007 aa10.23□□□□□ -0.77
HDAC6-209ENST00000440653 BDP1A6H8Y1 2624 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 DDTLA6NHG4 134 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 BTBD19C9JJ37 291 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 STX10O60499 249 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 FOSP01100 380 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 EEF2P13639 858 aaKnown RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 TNNT1P13805 278 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 ELNP15502 786 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 HOXD10P28358 340 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 GTF2A2P52657 109 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 ATP2B2Q01814 1243 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 TBX2Q13207 712 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 SPDYE2Q495Y8 402 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 NAALADL2Q58DX5 795 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 KRT79Q5XKE5 535 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 BTNL9Q6UXG8 535 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 FAM83AQ86UY5 434 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 C17orf53Q8N3J3 647 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 GIMAP8Q8ND71 665 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 NELFBQ8WX92 580 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 DHTKD1Q96HY7 919 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 MTMR9Q96QG7 549 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 PANX2Q96RD6 677 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 C7orf25Q9BPX7 421 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 UBA5Q9GZZ9 404 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 TMX1Q9H3N1 280 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms