RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 KRT79Q5XKE5 535 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 SV2BQ7L1I2 683 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 CPLX4Q7Z7G2 160 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 RPAINQ86UA6 219 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 GRAPLQ8TC17 118 aaPredicted RBP10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 CABS1Q96KC9 395 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 MAD2L2Q9UI95 211 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 CD2APQ9Y5K6 639 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 CHMP2AO43633 222 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 COPB2P35606 906 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 LONP1P36776 959 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 CYP4A11Q02928 519 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 TTMPQ5BVD1 217 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 CHADLQ6NUI6 762 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 MDM1Q8TC05 714 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 ORC4O43929 436 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 GDF11O95390 407 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 CCDC172P0C7W6 258 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 ERFP50548 548 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 NPY5RQ15761 445 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 TBC1D10BQ4KMP7 808 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 FAM133BQ5BKY9 247 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 ANKRD40Q6AI12 368 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 HAUS4Q9H6D7 363 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 KCND1Q9NSA2 647 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 STK38LQ9Y2H1 464 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 EIF3HO15372 352 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 KRT83P78385 493 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 PPP1R7Q15435 360 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 PRR5LQ6MZQ0 368 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 DGKHQ86XP1 1220 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 MB21D1Q8N884 522 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 NAA15Q9BXJ9 866 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 MYH10P35580 1976 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 MYH8P13535 1937 aa10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 COL1A1P02452 1464 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-202ENST00000439374 EPHB6O15197 1021 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 CEP104O60308 925 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 OPA1O60313 960 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 LGR5O75473 907 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 GLIS3Q8NEA6 775 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 PPP1R1BQ9UD71 204 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 NPHP3-ACAD11A0A0J9YXS1 232 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 GLI1P08151 1106 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 ADCY7P51828 1080 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 AMPD3Q01432 767 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 HERC4Q5GLZ8 1057 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 TRAPPC11Q7Z392 1133 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 HNRNPLLQ8WVV9 542 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 FAM184BQ9ULE4 1060 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 H7C1D1 291 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 PRPF6O94906 941 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 NR1D1P20393 614 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 STAT3P40763 770 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 CCDC25Q86WR0 208 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 KCNQ5Q9NR82 932 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 CRYBG1Q9Y4K1 1723 aa10.94□□□□□ -0.66
CDC42SE1-202ENST00000439374 STXBP3O00186 592 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 KCNK3O14649 394 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 SLC1A4P43007 532 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 SLC35G1Q2M3R5 365 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 APTXQ7Z2E3 356 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 KRT25Q7Z3Z0 450 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 ALS2CR12Q96Q35 445 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 NUDT12Q9BQG2 462 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 FAM167BQ9BTA0 163 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 POLLQ9UGP5 575 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 MYH2Q9UKX2 1941 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 SFI1A8K8P3 1242 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 SEMA3EO15041 775 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 GRM4Q14833 912 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 P2RX5Q93086 422 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 RBM17Q96I25 401 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 DNAJC17Q9NVM6 304 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 KIAA1024Q9UPX6 916 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 THRAP3Q9Y2W1 955 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 LSP1P33241 339 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 DCAF17Q5H9S7 520 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 IQCEQ6IPM2 695 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 WDR59Q6PJI9 974 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 OSBPL9Q96SU4 736 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms