RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PDXDC2PQ6P474 469 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF790Q6PG37 636 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 CRELD2Q6UXH1 353 aaPredicted RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 FAM47EQ6ZV65 393 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 EPAS1Q99814 870 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 GHRP10912 638 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PRPHP41219 470 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 BIRC3Q13489 604 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 CWF19L1Q69YN2 538 aaKnown RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 MFSD6Q6ZSS7 791 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 TRIM73Q86UV7 250 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 MREGQ8N565 214 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 INTS9Q9NV88 658 aaKnown RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 SWAP70Q9UH65 585 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ZMYND8Q9ULU4 1186 aaPredicted RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 C2CD2Q9Y426 696 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 MLH3Q9UHC1 1453 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 TMEM131LA2VDJ0 1609 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 C5orf60A6NFR6 353 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 H0YGN5 161 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 FOXO4P98177 505 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 EMC10Q5UCC4 262 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.16□□□□□ -1.13e-7■□□□□ 11.1
CPSF6-202ENST00000435070 CNNM1Q9NRU3 951 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 NFS1Q9Y697 457 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 GOLGA6L10A0A0M3HER8 536 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SMIM22K7EJ46 135 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 RTN3O95197 1032 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SESN3P58005 492 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 LACTBP83111 547 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 KIAA0753Q2KHM9 967 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 CCDC57Q2TAC2 916 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SOGA3Q5TF21 947 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF654Q8IZM8 581 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 DUSP9Q99956 384 aaKnown RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 PACSIN1Q9BY11 444 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SUDS3Q9H7L9 328 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 ARMT1Q9H993 441 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 PLAGL2Q9UPG8 496 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 FCER1AP12319 257 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 ITGA4P13612 1032 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 TNFRSF8P28908 595 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 NCALDP61601 193 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 IFI35P80217 286 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 CCHCR1Q8TD31 782 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 TRIM4Q9C037 500 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 STK36Q9NRP7 1315 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 C3P01024 1663 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 ATP11AP98196 1134 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 PDE4DQ08499 809 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SGMS1Q86VZ5 419 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 RASGRP4Q8TDF6 673 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 SPDYE3A6NKU9 549 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 AHCYL1O43865 530 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 HIP1RO75146 1068 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 PLEKHA8P1O95397 391 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 FESP07332 822 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 FERP16591 822 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 CCND1P24385 295 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 PRPF4BQ13523 1007 aaKnown RBP8.16□□□□□ -1.1
CPSF6-202ENST00000435070 IL17AQ16552 155 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 ERMARDQ5T6L9 678 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 TTI2Q6NXR4 508 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF662Q6ZS27 426 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 RUBCNQ92622 972 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 FAM129AQ9BZQ8 928 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 DLGAP2Q9P1A6 1054 aa8.16□□□□□ -1.1
CPSF6-202ENST00000435070 STXBP3O00186 592 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 TTI1O43156 1089 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 COPB2P35606 906 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF268Q14587 947 aaPredicted RBP8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ARMC9Q7Z3E5 817 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF572Q7Z3I7 529 aaPredicted RBP8.15□□□□□ -1.1
CPSF6-202ENST00000435070 TBC1D5Q92609 795 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 PAIP2Q9BPZ3 127 aaKnown RBP8.15□□□□□ -1.1
CPSF6-202ENST00000435070 DDX23Q9BUQ8 820 aaKnown RBP8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ISCUQ9H1K1 167 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ADAMTS1Q9UHI8 967 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 SPATA31D1Q6ZQQ2 1576 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 UBA7P41226 1012 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 MCAMP43121 646 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 NLRP5P59047 1200 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ASIC1P78348 528 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ADCY1Q08828 1119 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 STK4Q13043 487 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 P3H4Q92791 437 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 SYT15Q9BQS2 421 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 PIH1D3Q9NQM4 214 aaKnown RBP8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ADAM22Q9P0K1 906 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ITSN1Q15811 1721 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 ADAMTS3O15072 1205 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 MBD4O95243 580 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 PDCD2Q16342 344 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms