RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 AOC3Q16853 763 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 KCNMB3Q9NPA1 279 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 PI4KBQ9UBF8 816 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 KIF20AO95235 890 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
CLK1-205ENST00000434813 USP11P51784 963 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 CDC37Q16543 378 aaPredicted RBP20.65■□□□□ 0.9
CLK1-205ENST00000434813 CERKLQ49MI3 558 aaPredicted RBP20.65■□□□□ 0.9
CLK1-205ENST00000434813 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 MOXD1Q6UVY6 613 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 CCDC84Q86UT8 332 aaPredicted RBP20.65■□□□□ 0.9
CLK1-205ENST00000434813 MBOAT7Q96N66 472 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 FAM198AQ9UFP1 575 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 PCDHA1Q9Y5I3 950 aa20.65■□□□□ 0.9
CLK1-205ENST00000434813 SCN9AQ15858 1988 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 CYP3A7-CYP3A51PA0A087WV96 503 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 DDTLA6NHG4 134 aaPredicted RBP20.64■□□□□ 0.89
CLK1-205ENST00000434813 CYP3A7P24462 503 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 AP3B2Q13367 1082 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 ZCWPW2Q504Y3 356 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 DACT2Q5SW24 774 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 SLFN13Q68D06 897 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 TATDN1Q6P1N9 297 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 MYOCDQ8IZQ8 938 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 PURBQ96QR8 312 aaKnown RBP20.64■□□□□ 0.89
CLK1-205ENST00000434813 FUT8Q9BYC5 575 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 KCNQ5Q9NR82 932 aa20.64■□□□□ 0.89
CLK1-205ENST00000434813 FAM196BA6NMK8 535 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 CACNB3P54284 484 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 LONRF2Q1L5Z9 754 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 PAPD7Q5XG87 772 aaKnown RBP20.63■□□□□ 0.89
CLK1-205ENST00000434813 USP17L6PQ6QN14 398 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 KIAA0825Q8IV33 1275 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 PNKPQ96T60 521 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 VAV2P52735 878 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 FAM26FQ5R3K3 315 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 SH3BP5LQ7L8J4 393 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 GLIS3Q8NEA6 775 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 GJA10Q969M2 543 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 LACRTQ9GZZ8 138 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 BMP2KQ9NSY1 1161 aaPredicted RBP20.63■□□□□ 0.89
CLK1-205ENST00000434813 PCDHAC2Q9Y5I4 1007 aa20.63■□□□□ 0.89
CLK1-205ENST00000434813 RCCD1A6NED2 376 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 PPIP5K2O43314 1243 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 TCP10Q12799 353 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 SHROOM1Q2M3G4 852 aaPredicted RBP20.62■□□□□ 0.89
CLK1-205ENST00000434813 MCTP2Q6DN12 878 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 TMEM179Q6ZVK1 233 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 CRYGNQ8WXF5 182 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 TSGA10Q9BZW7 698 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 PANK4Q9NVE7 773 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 TFR2Q9UP52 801 aa20.62■□□□□ 0.89
CLK1-205ENST00000434813 ANO9A1A5B4 782 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 EPHB6O15197 1021 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 ATP1A1P05023 1023 aaKnown RBP20.61■□□□□ 0.89
CLK1-205ENST00000434813 TUBBP07437 444 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 ICA1Q05084 483 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 LRRC41Q15345 812 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 NCAPH2Q6IBW4 605 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 SLFN12Q8IYM2 578 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 RTKN2Q8IZC4 609 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 CCDC42Q96M95 316 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 FAM207AQ9NSI2 230 aaPredicted RBP20.61■□□□□ 0.89
CLK1-205ENST00000434813 ZNF771Q7L3S4 317 aaPredicted RBP20.61■□□□□ 0.89
CLK1-205ENST00000434813 SIAH1Q8IUQ4 282 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 TRIM34Q9BYJ4 488 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 SERPINA10Q9UK55 444 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 SAR1BQ9Y6B6 198 aa20.61■□□□□ 0.89
CLK1-205ENST00000434813 ENC1O14682 589 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 MAP2K7O14733 419 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 MEIS2O14770 477 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 ERLIN1O75477 346 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 PLA2G4BP0C869 781 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 RBM5P52756 815 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLK1-205ENST00000434813 FKBP3Q00688 224 aaKnown RBP20.6■□□□□ 0.89
CLK1-205ENST00000434813 BEND6Q5SZJ8 279 aaPredicted RBP20.6■□□□□ 0.89
CLK1-205ENST00000434813 ARHGAP27Q6ZUM4 889 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 CCDC65Q8IXS2 484 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 EDEM3Q9BZQ6 932 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 ARHGAP20Q9P2F6 1191 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 KIAA1024Q9UPX6 916 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 COL4A3BPQ9Y5P4 624 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 ATRNL1Q5VV63 1379 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 POTEB3A0JP26 581 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 POTECB2RU33 542 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 E9PMD0 336 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 ZNF263O14978 683 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms