RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 NID2Q14112 1375 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 TMCO5BA8MYB1 307 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-202ENST00000431918 NSMFQ6X4W1 530 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 CNPY4Q8N129 248 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 PIGOQ8TEQ8 1089 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 KBTBD4Q9NVX7 518 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 GAKO14976 1311 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 COL16A1Q07092 1604 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-202ENST00000431918 STAT2P52630 851 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 TAF4BQ92750 862 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 BHMT2Q9H2M3 363 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 CLIC2O15247 247 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 BUB1O43683 1085 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 ALAS1P13196 640 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 GRB10Q13322 594 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 CTTNQ14247 550 aaKnown RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 ANKRD7Q92527 254 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 COASYQ13057 564 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 C15orf52Q6ZUT6 534 aaKnown RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 KRT26Q7Z3Y9 468 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 PRPF6O94906 941 aaKnown RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 NR2F2P24468 414 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 KCNJ6P48051 423 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 MAN2A1Q16706 1144 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 HS2ST1Q7LGA3 356 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 HAUS4Q9H6D7 363 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
CLDN4-202ENST00000431918 CICQ96RK0 1608 aaPredicted RBP12.61□□□□□ -0.39
CLDN4-202ENST00000431918 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 IQCEQ6IPM2 695 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 TXLNBQ8N3L3 684 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 ECE1P42892 770 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 ERVK-24P63145 666 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 ZBED6P86452 979 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 TRAF1Q13077 416 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 HDAC6Q9UBN7 1215 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 SAR1BQ9Y6B6 198 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 SORBS3O60504 671 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 ZMYND10O75800 440 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 TBX2Q13207 712 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 PROM2Q8N271 834 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 C7orf25Q9BPX7 421 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
CLDN4-202ENST00000431918 SLC9C1Q4G0N8 1177 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 SRGAP1Q7Z6B7 1085 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 PARD6BQ9BYG5 372 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 RABGAP1Q9Y3P9 1069 aa12.6□□□□□ -0.39
CLDN4-202ENST00000431918 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 ARHGEF35A5YM69 484 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 CYP2J2P51589 502 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 MRPS25P82663 173 aaKnown RBP12.59□□□□□ -0.39
CLDN4-202ENST00000431918 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 CCDC93Q567U6 631 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
CLDN4-202ENST00000431918 COL4A3BPQ9Y5P4 624 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
CLDN4-202ENST00000431918 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
CLDN4-202ENST00000431918 CXCR5P32302 372 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 TTI2Q6NXR4 508 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 KCNK18Q7Z418 384 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 CCPG1Q9ULG6 757 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms