RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 DALRD3Q5D0E6 543 aaKnown RBP15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 HAUS3Q68CZ6 603 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 ERMNQ8TAM6 284 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 CHURC1Q8WUH1 139 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 TAOK3Q9H2K8 898 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 MRPL44Q9H9J2 332 aaKnown RBP15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 L2HGDHQ9H9P8 463 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 MYOZ2Q9NPC6 264 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 PANK4Q9NVE7 773 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 ADGRG1Q9Y653 693 aa15.6■□□□□ 0.09
APOBEC3D-202ENST00000427494 SHTN1A0MZ66 631 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 CIITAP33076 1130 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 ZNF76P36508 570 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 NAA30Q147X3 362 aaPredicted RBP15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 GPBP1Q86WP2 473 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 ERO1AQ96HE7 468 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 PDCL3Q9H2J4 239 aa15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
APOBEC3D-202ENST00000427494 POTEFA5A3E0 1075 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 CFBP00751 764 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 POTEIP0CG38 1075 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 BRCA1P38398 1863 aaKnown RBP15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 GNG11P61952 73 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 ERVK-24P63145 666 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 SPIRE1Q08AE8 756 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 LRRC41Q15345 812 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 POTEGQ6S5H5 508 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 CYP26C1Q6V0L0 522 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 GLIS3Q8NEA6 775 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 NOC4LQ9BVI4 516 aaKnown RBP15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 GLIS2Q9BZE0 524 aaPredicted RBP15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 PGAP2Q9UHJ9 254 aa15.58■□□□□ 0.09
APOBEC3D-202ENST00000427494 TTC26A0AVF1 554 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 FANCGO15287 622 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 MSH4O15457 936 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 FGFR1OPO95684 399 aaKnown RBP15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 CYP3A4P08684 503 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 CASQ1P31415 396 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 TBC1D8BQ0IIM8 1120 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 CCDC84Q86UT8 332 aaPredicted RBP15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 FAM160B2Q86V87 743 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 FAM20AQ96MK3 541 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 TSG101Q99816 390 aa15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 SCAF8Q9UPN6 1271 aaKnown RBP15.58■□□□□ 0.08
APOBEC3D-202ENST00000427494 NPHP3-ACAD11A0A0J9YXS1 232 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 GCOM1H8Y6P7 765 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 POLR2MP0CAP2 368 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 LRRC63Q05C16 580 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 MIIPQ5JXC2 388 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 MYOCDQ8IZQ8 938 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 WDR24Q96S15 920 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 CAPN11Q9UMQ6 739 aa15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 LUC7L2Q9Y383 392 aaKnown RBP15.57■□□□□ 0.08
APOBEC3D-202ENST00000427494 PLA2G6O60733 806 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 URI1O94763 535 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 KRT18P05783 430 aaKnown RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 ASNSP08243 561 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 CYP11B2P19099 503 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 POLD1P28340 1107 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 TNIP1Q15025 636 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 FKBP15Q5T1M5 1219 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 CATSPER3Q86XQ3 398 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 CYP2W1Q8TAV3 490 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 TBC1D5Q92609 795 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 PCMTD1Q96MG8 357 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 FEZ1Q99689 392 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 LZTFL1Q9NQ48 299 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 FBXO28Q9NVF7 368 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 FEM1BQ9UK73 627 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 MRPL11Q9Y3B7 192 aaKnown RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 STK24Q9Y6E0 443 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 V9GYY5 206 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 DCAF8L1A6NGE4 600 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 RPA1P27694 616 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 KLK7P49862 253 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 SLC12A3P55017 1021 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 MAP3K10Q02779 954 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 RAD51AP2Q09MP3 1159 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 RASA3Q14644 834 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 TSR1Q2NL82 804 aaKnown RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 TEX2Q8IWB9 1127 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 ACRBPQ8NEB7 543 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 OR8K1Q8NGG5 319 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 VAV3Q9UKW4 847 aa15.56■□□□□ 0.08
APOBEC3D-202ENST00000427494 A0A0U1RQJ8 604 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 MEIS1O00470 390 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 NKRFO15226 690 aaKnown RBP eCLIP15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 TRIM21P19474 475 aaKnown RBP15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 PDCL2Q8N4E4 241 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 ATRIPQ8WXE1 791 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms