RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 PEX10O60683 326 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 ARP10275 920 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 HSD17B4P51659 736 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 CLMNQ96JQ2 1002 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 EHMT1Q9H9B1 1298 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 PYCARDQ9ULZ3 195 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 CSADQ9Y600 493 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 EML1O00423 815 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 TBX3O15119 743 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 RHOBTB3O94955 611 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 MYL1P05976 194 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZNF18P17022 549 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 RPS6P62753 249 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 CACNB1Q02641 598 aaPredicted RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 STK4Q13043 487 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 PAK1Q13153 545 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 KCNB1Q14721 858 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 CEP55Q53EZ4 464 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 NOL9Q5SY16 702 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 CATSPER3Q86XQ3 398 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 DDX12PQ92771 950 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 CDCA5Q96FF9 252 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 FAM20AQ96MK3 541 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 SLC39A2Q9NP94 309 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 RNF146Q9NTX7 359 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 NPHP3-ACAD11A0A0J9YXS1 232 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 DSG3P32926 999 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 PMS1P54277 932 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 PSMC6P62333 389 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 COG2Q14746 738 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 TREML2Q5T2D2 321 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 LRCH2Q5VUJ6 765 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 CCDC47Q96A33 483 aaKnown RBP11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 TAAR1Q96RJ0 339 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 RGL1Q9NZL6 768 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
SMPD4P1-201ENST00000416717 MYCLP12524 364 aaPredicted RBP11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 PDE4CQ08493 712 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 GADL1Q6ZQY3 521 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 CATSPERGQ6ZRH7 1159 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 ADSSL1Q8N142 457 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 GIMAP8Q8ND71 665 aaPredicted RBP11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 ERMNQ8TAM6 284 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 C12orf42Q96LP6 360 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 WDR11Q9BZH6 1224 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 NT5C3AQ9H0P0 336 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 INTS13Q9NVM9 706 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 RWDD2AQ9UIY3 292 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 KIAA1217Q5T5P2 1943 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 CBFA2T2O43439 604 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 GAS7O60861 476 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 TPM3P06753 285 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 PLA2G4BP0C869 781 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 ITGB5P18084 799 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 CLCN1P35523 988 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 PABPC4Q13310 644 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 BAATQ14032 418 aaPredicted RBP11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 HAUS3Q68CZ6 603 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 RNF207Q6ZRF8 634 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
SMPD4P1-201ENST00000416717 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 IRF6O14896 467 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 NF2P35240 595 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 GOLGA8FQ08AF8 430 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 GOLGA8DPQ0D2H9 430 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 STIM1Q13586 685 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 CT47A1Q5JQC4 288 aaPredicted RBP11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 HYIQ5T013 277 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 GPBP1Q86WP2 473 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 KIAA0895Q8NCT3 520 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 GLIS3Q8NEA6 775 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 EIF2AK1Q9BQI3 630 aaKnown RBP11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 POLD4Q9HCU8 107 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 TBC1D7Q9P0N9 293 aa11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZNF214Q9UL59 606 aaPredicted RBP11.92□□□□□ -0.5
SMPD4P1-201ENST00000416717 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 PSMA7O14818 248 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 PSMD10O75832 226 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 KRT18P05783 430 aaKnown RBP11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms