RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 A6NJR5 290 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 M0R2N6 131 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 SNRPB2P08579 225 aaKnown RBP-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 PRR35P0CG20 571 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 RPS19P39019 145 aaKnown RBP-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 ETV3P41162 512 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 XKR6Q5GH73 641 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 LYG1Q8N1E2 194 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 VGLL2Q8N8G2 317 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 PLA2G12BQ9BX93 195 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 ELP3Q9H9T3 547 aa-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 EPN1Q9Y6I3 576 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-88P-201ENST00000411220 TENM4Q6N022 2769 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 RBM47A0AV96 593 aaKnown RBP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 CDC14BO60729 498 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 FAM20BO75063 409 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 GSTP1P09211 210 aaKnown RBP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 T-ENOLP0DO92 83 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZEB1P37275 1124 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 PLA2G5P39877 138 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 HTR6P50406 440 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 PLCD1P51178 756 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 CFHR1Q03591 330 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 DUSP8Q13202 625 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 TRIM25Q14258 630 aaKnown RBP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 SLBPQ14493 270 aaKnown RBP eCLIP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 NPY5RQ15761 445 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 AMHR2Q16671 573 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF568Q3ZCX4 644 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 MORN5Q5VZ52 161 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 HIST2H2BDQ6DRA6 164 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 KRT73Q86Y46 540 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 TPCN2Q8NHX9 752 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF507Q8TCN5 953 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 CAVIN3Q969G5 261 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 MYO19Q96H55 970 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 SLITRK1Q96PX8 696 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 FOXP3Q9BZS1 431 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 POLR3EQ9NVU0 708 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 SYBUQ9NX95 663 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 FAM13BQ9NYF5 915 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 TMEM63CQ9P1W3 806 aa-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF777Q9ULD5 760 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 DIS3Q9Y2L1 958 aaKnown RBP-0.35□□□□□ -2.47
RNU4-88P-201ENST00000411220 TNFRSF10CO14798 259 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 CYP7B1O75881 506 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 GM2AP17900 193 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF10P21506 573 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 DRD4P21917 467 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 KELP23276 732 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 CAP2P40123 477 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 SEC24CP53992 1094 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 JAM2P57087 298 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 CNGB1Q14028 1251 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 SLC9A5Q14940 896 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF585BQ52M93 769 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 KHDRBS2Q5VWX1 349 aaKnown RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 DMKNQ6E0U4 476 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 PDE12Q6L8Q7 609 aaKnown RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZPBP2Q6X784 338 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 LILRA3Q8N6C8 439 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 TSEN2Q8NCE0 465 aaKnown RBP-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 MAML3Q96JK9 1138 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 COQ10AQ96MF6 247 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 CHRDL1Q9BU40 450 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 CSADQ9Y600 493 aa-0.36□□□□□ -2.47
RNU4-88P-201ENST00000411220 SSU72P8A0A1W2PR75 194 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 OAZ2O95190 189 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 DNAH10OSP0CZ25 163 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 EDN3P14138 238 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 SCP2P22307 547 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 TRIM26Q12899 539 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 FOXI1Q12951 378 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 CLEC16AQ2KHT3 1053 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 ADGRE4PQ86SQ3 457 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 LCORLQ8N3X6 602 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 DPF1Q92782 380 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 PMEPA1Q969W9 287 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 DPYSL5Q9BPU6 564 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 NRIP3Q9NQ35 241 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 PLA2G3Q9NZ20 509 aa-0.37□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 A0A1B0GU03 582 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 FKTNO75072 461 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 PRB2P02812 416 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 PRB3Q04118 309 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 ADAM15Q13444 863 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 TIGD2Q4W5G0 525 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 SPTY2D1Q68D10 685 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 NAA40Q86UY6 237 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 D2HGDHQ8N465 521 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 USHBP1Q8N6Y0 703 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 BANK1Q8NDB2 785 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 XAGE3Q8WTP9 111 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 CASKIN2Q8WXE0 1202 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 LINC00476Q8WZB0 136 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 SLC9A6Q92581 669 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 KCNB2Q92953 911 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 UHRF2Q96PU4 802 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms