RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 FAM114A1Q8IWE2 563 aa27.52■■■□□ 2
DNMT3A-206ENST00000406659 PRPF38AQ8NAV1 312 aaKnown RBP27.52■■■□□ 2
DNMT3A-206ENST00000406659 PANX2Q96RD6 677 aa27.52■■■□□ 2
DNMT3A-206ENST00000406659 KIF2AO00139 706 aaPredicted RBP27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 MED24O75448 989 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 DCAF15Q66K64 600 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 NLGN2Q8NFZ4 835 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 CPLX3Q8WVH0 158 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 SLF1Q9BQI6 1058 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 PAXBP1Q9Y5B6 917 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 ZNF541Q9H0D2 1346 aa27.51■■□□□ 1.99
DNMT3A-206ENST00000406659 UBXN1Q04323 297 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 NBPF12Q5TAG4 269 aaPredicted RBP27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 CYP2W1Q8TAV3 490 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 DNAJC19Q96DA6 116 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 CCPG1Q9ULG6 757 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 ICAM1P05362 532 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 GPBP1Q86WP2 473 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 GUF1Q8N442 669 aaKnown RBP27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 ZNF592Q92610 1267 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 PANK4Q9NVE7 773 aa27.5■■□□□ 1.99
DNMT3A-206ENST00000406659 CENPPQ6IPU0 288 aa27.49■■□□□ 1.99
DNMT3A-206ENST00000406659 CATSPER3Q86XQ3 398 aa27.49■■□□□ 1.99
DNMT3A-206ENST00000406659 AGBL1Q96MI9 1066 aa27.49■■□□□ 1.99
DNMT3A-206ENST00000406659 SEMA6BQ9H3T3 888 aa27.49■■□□□ 1.99
DNMT3A-206ENST00000406659 IGLV3-22A0A075B6J6 115 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 LGALS16A8MUM7 142 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 RPA1P27694 616 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 EHHADHQ08426 723 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 COASYQ13057 564 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 TRIM14Q14142 442 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 CCDC65Q8IXS2 484 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 HOOK2Q96ED9 719 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 POTEFA5A3E0 1075 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 PES1O00541 588 aaKnown RBP27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 ZSCAN12O43309 604 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 POTEIP0CG38 1075 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 POTEGQ6S5H5 508 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 POTEEQ6S8J3 1075 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 APOBEC3FQ8IUX4 373 aaKnown RBP27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 CNGA4Q8IV77 575 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 VAV3Q9UKW4 847 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 DNM3Q9UQ16 869 aa27.48■■□□□ 1.99
DNMT3A-206ENST00000406659 RIOK3O14730 519 aaKnown RBP27.47■■□□□ 1.99
DNMT3A-206ENST00000406659 MFAP3LO75121 409 aa27.47■■□□□ 1.99
DNMT3A-206ENST00000406659 CASP14P31944 242 aa27.47■■□□□ 1.99
DNMT3A-206ENST00000406659 MB21D1Q8N884 522 aa27.47■■□□□ 1.99
DNMT3A-206ENST00000406659 CCDC51Q96ER9 411 aa27.47■■□□□ 1.99
DNMT3A-206ENST00000406659 TANGO6Q9C0B7 1094 aa27.47■■□□□ 1.99
DNMT3A-206ENST00000406659 KRT18P05783 430 aaKnown RBP27.46■■□□□ 1.99
DNMT3A-206ENST00000406659 CNOT6LQ96LI5 555 aaKnown RBP27.46■■□□□ 1.99
DNMT3A-206ENST00000406659 TUBGCP2Q9BSJ2 902 aa27.46■■□□□ 1.99
DNMT3A-206ENST00000406659 NAA15Q9BXJ9 866 aaKnown RBP27.46■■□□□ 1.99
DNMT3A-206ENST00000406659 ZNF536O15090 1300 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 DYNC1I1O14576 645 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 FGFR1OPO95684 399 aaKnown RBP27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 GYPCP04921 128 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 SPATA31C1P0DKV0 1188 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 PRKCSHP14314 528 aaPredicted RBP27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 MTIF2P46199 727 aaKnown RBP27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 USP14P54578 494 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 UBXN2AP68543 259 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 ANGEL2Q5VTE6 544 aaKnown RBP27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 WDR18Q9BV38 432 aa27.45■■□□□ 1.99
DNMT3A-206ENST00000406659 TUBB4AP04350 444 aa27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 CYP11B2P19099 503 aa27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 SLC12A3P55017 1021 aa27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 MTMR2Q13614 643 aa27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 FAM26FQ5R3K3 315 aa27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 TSG101Q99816 390 aa27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 POLR3CQ9BUI4 534 aaPredicted RBP27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 CTDP1Q9Y5B0 961 aaPredicted RBP27.45■■□□□ 1.98
DNMT3A-206ENST00000406659 A0A1W2PQC6 194 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 MEIS1O00470 390 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 DNM2P50570 870 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 HSD17B4P51659 736 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 LRRC63Q05C16 580 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 LRRC41Q15345 812 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 CEP55Q53EZ4 464 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 LRCH2Q5VUJ6 765 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 MCF2L2Q86YR7 1114 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 MYOCDQ8IZQ8 938 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 ZNF507Q8TCN5 953 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 EIF2AK1Q9BQI3 630 aaKnown RBP27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 PPP2R2CQ9Y2T4 447 aa27.44■■□□□ 1.98
DNMT3A-206ENST00000406659 NPHP3-ACAD11A0A0J9YXS1 232 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 FLOT1O75955 427 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 GTF2F1P35269 517 aaKnown RBP eCLIP27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 FXR1P51114 621 aaKnown RBP eCLIP27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 ARHGAP27Q6ZUM4 889 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 SCYL3Q8IZE3 742 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 CPXCR1Q8N123 301 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 KIF18AQ8NI77 898 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 SLC5A5Q92911 643 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 EEF2KMTQ96G04 330 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 ZNF112Q9UJU3 913 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 RABGAP1Q9Y3P9 1069 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 VCAM1P19320 739 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 DGKZQ13574 1117 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms