RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 NBPF14Q5TI25 921 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 CREB3L3Q68CJ9 461 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 NBPF15Q8N660 670 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 KATNAL1Q9BW62 490 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 TNKS2Q9H2K2 1166 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 RSAD1Q9HA92 442 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 BCL9LQ86UU0 1499 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 FRMPD2Q68DX3 1309 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 MEGF6O75095 1541 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 PARP4Q9UKK3 1724 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 SMARCA1P28370 1054 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 SSRP1Q08945 709 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 COX10Q12887 443 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 PLCB4Q15147 1175 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 SPC24Q8NBT2 197 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 CRB3Q9BUF7 120 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 ACTR10Q9NZ32 417 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 PPT2Q9UMR5 302 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 PKD1L3Q7Z443 1732 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 RPAP1Q9BWH6 1393 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 TSPY2A6NKD2 308 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 STXBP3O00186 592 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 STX6O43752 255 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 DDX58O95786 925 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC4A1P02730 911 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 FAM153BP0C7A2 387 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 TSPY3P0CV98 308 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 TSPY8P0CW00 308 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 HSD3B1P14060 373 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 GRK2P25098 689 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 ABCD1P33897 745 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 EIF4A3P38919 411 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 KCNQ4P56696 695 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 TSPY1Q01534 308 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 MECOMQ03112 1051 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 SMCR8Q8TEV9 937 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 ZNF296Q8WUU4 475 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 FAM89AQ96GI7 184 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 TNIP3Q96KP6 325 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 MAN1C1Q9NR34 630 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 TRMT13Q9NUP7 481 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 HYPKQ9NX55 129 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 BLOC1S6Q9UL45 172 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 PCDHB9Q9Y5E1 797 aa6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 KDM6AO15550 1401 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-202ENST00000399438 STRN3Q13033 797 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 SYDE2Q5VT97 1194 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 RNF219Q5W0B1 726 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 OTUD7BQ6GQQ9 843 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 NAT8LQ8N9F0 302 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 RDH13Q8NBN7 331 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 ZSWIM2Q8NEG5 633 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 MGARPQ8TDB4 240 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 COG1Q8WTW3 980 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 NT5C1AQ9BXI3 368 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 GJB4Q9NTQ9 266 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 STIM2Q9P246 746 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 NFKBIL1Q9UBC1 381 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 TRPC6Q9Y210 931 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC27A2O14975 620 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 RPS6KB1P23443 525 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CD86P42081 329 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 KCNC4Q03721 635 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 STAT4Q14765 748 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 HEATR6Q6AI08 1181 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 FBXL19Q6PCT2 694 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 NRSN1Q8IZ57 195 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC39A7Q92504 469 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 ISCA1Q9BUE6 129 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 LIMCH1Q9UPQ0 1083 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CYP46A1Q9Y6A2 500 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 DDX3YO15523 660 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 SKAP2O75563 359 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 USP17L7P0C7H9 530 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 MUTP22033 750 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 LPOP22079 712 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 IGFBP4P22692 258 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 ADORA1P30542 326 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 STIP1P31948 543 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CHKAP35790 457 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 PAPOLAP51003 745 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 DMTNQ08495 405 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CCDC15Q0P6D6 951 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 TTC31Q49AM3 519 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 HECTD3Q5T447 861 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 FAAH2Q6GMR7 532 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 NEK9Q8TD19 979 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 TSGA13Q96PP4 275 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 TTC12Q9H892 705 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 CYP4F11Q9HBI6 524 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 TCF7L1Q9HCS4 588 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 PDLIM7Q9NR12 457 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 DENND2AQ9ULE3 1009 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms