RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ASIC1P78348 528 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
COL25A1-201ENST00000399126 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
COL25A1-201ENST00000399126 CUEDC2Q9H467 287 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 AS3MTQ9HBK9 375 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 RIPK3Q9Y572 518 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 PITPNM2Q9BZ72 1349 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 MED24O75448 989 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 SERPINC1P01008 464 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 CYP3A4P08684 503 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 CCT6AP40227 531 aaKnown RBP16.94■□□□□ 0.3
COL25A1-201ENST00000399126 TRAF1Q13077 416 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 DYMQ7RTS9 669 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 SULF1Q8IWU6 871 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 RAD54LQ92698 747 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 PURBQ96QR8 312 aaKnown RBP16.94■□□□□ 0.3
COL25A1-201ENST00000399126 INTS13Q9NVM9 706 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 PYCARDQ9ULZ3 195 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 WDR90Q96KV7 1748 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 E9PMD0 336 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 VWA5AO00534 786 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 FCER1AP12319 257 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 MCTP2Q6DN12 878 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 NCAPH2Q6IBW4 605 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 PTPRFP10586 1907 aa16.94■□□□□ 0.3
COL25A1-201ENST00000399126 TRIM49BA6NDI0 452 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 HSD17B4P51659 736 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 UBASH3AP57075 661 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 SLFN12Q8IYM2 578 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
COL25A1-201ENST00000399126 C7orf25Q9BPX7 421 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 RMND1Q9NWS8 449 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 AFG3L2Q9Y4W6 797 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 POTEFA5A3E0 1075 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 PEX10O60683 326 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
COL25A1-201ENST00000399126 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 SV2BQ7L1I2 683 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 MAGEF1Q9HAY2 307 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 VAV3Q9UKW4 847 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 RHOBTB3O94955 611 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 STK4Q13043 487 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 NELFBQ8WX92 580 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
COL25A1-201ENST00000399126 STK17AQ9UEE5 414 aa16.93■□□□□ 0.3
COL25A1-201ENST00000399126 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 EML1O00423 815 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 MEIS1O00470 390 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 PDE4DQ08499 809 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
COL25A1-201ENST00000399126 KCNB1Q14721 858 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
COL25A1-201ENST00000399126 SPATA1Q5VX52 437 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL25A1-201ENST00000399126 MYL1P05976 194 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 ARP10275 920 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 GPR162Q16538 588 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 CATSPER3Q86XQ3 398 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 CLMNQ96JQ2 1002 aa16.92■□□□□ 0.3
COL25A1-201ENST00000399126 TBX3O15119 743 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 PSMC6P62333 389 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 PAK1Q13153 545 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 ADSSL1Q8N142 457 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 C12orf42Q96LP6 360 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 SH3BP1Q9Y3L3 701 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 PCNTO95613 3336 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 RBBP6Q7Z6E9 1792 aaKnown RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 CHMP2AO43633 222 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 ZBED4O75132 1171 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 SPATA31C1P0DKV0 1188 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 APTXQ7Z2E3 356 aaKnown RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 TRERF1Q96PN7 1200 aa16.91■□□□□ 0.3
COL25A1-201ENST00000399126 CTDP1Q9Y5B0 961 aaPredicted RBP16.91■□□□□ 0.3
COL25A1-201ENST00000399126 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 ITGB5P18084 799 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 EPHX2P34913 555 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 MAP3K9P80192 1104 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 RAD51AP2Q09MP3 1159 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 HYIQ5T013 277 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 TREML2Q5T2D2 321 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 GLIS3Q8NEA6 775 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms