RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CYP4A11Q02928 519 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 PFKFB3Q16875 520 aaPredicted RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 UNC13DQ70J99 1090 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 DGKHQ86XP1 1220 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 ANKRD35Q8N283 1001 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 PPM1KQ8N3J5 372 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 CCHCR1Q8TD31 782 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 RUBCNQ92622 972 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 ELAC2Q9BQ52 826 aaKnown RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 LARSQ9P2J5 1176 aaKnown RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 HPCAL4Q9UM19 191 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 PTPRMP28827 1452 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 BACH1O14867 736 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 GAS7O60861 476 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 NOP53Q9NZM5 478 aaKnown RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 CEP72Q9P209 647 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 NCK2O43639 380 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 MMEP08473 750 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 GFPT1Q06210 699 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 ADCY2Q08462 1091 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PSMD1Q99460 953 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 SH3GLB2Q9NR46 395 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 CEP152O94986 1710 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 GFPT2O94808 682 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 FGGP02679 453 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PDE6CP51160 858 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 MAGOHP61326 146 aaKnown RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 FOXO4P98177 505 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 DPH6Q7L8W6 267 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 FAM186BQ8IYM0 893 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 TAF1DQ9H5J8 278 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 TXNDC9O14530 226 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 ZNF185O15231 689 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 SMIM24O75264 130 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 MAN1A1P33908 653 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PPP2R2AP63151 447 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 GUCY1A3Q02108 690 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 CCDC89Q8N998 374 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 MYO3AQ8NEV4 1616 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PSMD14O00487 310 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 CYP27B1O15528 508 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PSMC2P35998 433 aaKnown RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 FBXW10Q5XX13 1052 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 NUGGCQ68CJ6 796 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 AEBP2Q6ZN18 517 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 APBB1IPQ7Z5R6 666 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 PROM2Q8N271 834 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 RILPQ96NA2 401 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PNKPQ96T60 521 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 TRIM6Q9C030 488 aaPredicted RBP12.03□□□□□ -0.48
HPS4-202ENST00000398145 GCNT4Q9P109 453 aa12.03□□□□□ -0.48
HPS4-202ENST00000398145 PVALEFA0A1B0GWK0 134 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.48
HPS4-202ENST00000398145 SART1O43290 800 aaKnown RBP12.02□□□□□ -0.48
HPS4-202ENST00000398145 ECEL1O95672 775 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 PHBP35232 272 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 SP4Q02446 784 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 KCNB1Q14721 858 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 FAM83BQ5T0W9 1011 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 RASIP1Q5U651 963 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 ELOA2Q8IYF1 753 aaPredicted RBP12.02□□□□□ -0.48
HPS4-202ENST00000398145 IGDCC4Q8TDY8 1250 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.48
HPS4-202ENST00000398145 GRID2IPA4D2P6 1211 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 GSG1L2A8MUP6 293 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 ANTXR2P58335 489 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 DPYDQ12882 1025 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 TAF11Q15544 211 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 TRIM10Q9UDY6 481 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 HARSP12081 509 aaKnown RBP12.02□□□□□ -0.49
HPS4-202ENST00000398145 NCAPHQ15003 741 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 PALM2Q8IXS6 379 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 SH2D3CQ8N5H7 860 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 MIPOL1Q8TD10 442 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 VTI1AQ96AJ9 217 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 HVCN1Q96D96 273 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 PIGSQ96S52 555 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 TXLNGQ9NUQ3 528 aa12.02□□□□□ -0.49
HPS4-202ENST00000398145 MYO1FO00160 1098 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 NT5C2P49902 561 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ITIH3Q06033 890 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ASPRV1Q53RT3 343 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 PPP1R21Q6ZMI0 780 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 CTAGE3PQ8IX95 158 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms