RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 PDE1BQ01064 536 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 UCMAQ8WVF2 138 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 TCEANC2Q96MN5 208 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 TANGO6Q9C0B7 1094 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 CTAGE9A4FU28 777 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 TTI1O43156 1089 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 LCA5LO95447 670 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 UBL4AP11441 157 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 PORP16435 677 aaPredicted RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 MDH1P40925 334 aaKnown RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 PDE1AP54750 535 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 LSAMPQ13449 338 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 PRKG1Q13976 671 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 BCL2A1Q16548 175 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 CFAP100Q494V2 611 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 C1orf228Q6PIY5 440 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 KDM7AQ6ZMT4 941 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 FAM20CQ8IXL6 584 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 USP6NLQ92738 828 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 PTPRN2Q92932 1015 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 EPSTI1Q96J88 318 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 CEP44Q9C0F1 390 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 DHX36Q9H2U1 1008 aaKnown RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 C19orf44Q9H6X5 657 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 IP6K2Q9UHH9 426 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 TBC1D12O60347 775 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 GHRP10912 638 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 DDX5P17844 614 aaKnown RBP12.44□□□□□ -0.42
LAMB1-203ENST00000393560 CCT6AP40227 531 aaKnown RBP12.44□□□□□ -0.42
LAMB1-203ENST00000393560 CCNG1P51959 295 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 RASA2Q15283 850 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 PHLDB3Q6NSJ2 640 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 TMEM139Q8IV31 216 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 LRRC43Q8N309 656 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
LAMB1-203ENST00000393560 GSDMAQ96QA5 445 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 SEC63Q9UGP8 760 aaKnown RBP12.44□□□□□ -0.42
LAMB1-203ENST00000393560 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 IVNS1ABPQ9Y6Y0 642 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 TTC34A8MYJ7 566 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 GCP02774 474 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 ASLP04424 464 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 ATF3P18847 181 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 ATP6V1C1P21283 382 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 PCSK7Q16549 785 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 PDILTQ8N807 584 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 AZIN2Q96A70 460 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 CATSPER2Q96P56 530 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 KLHL42Q9P2K6 505 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 CTNNAL1Q9UBT7 734 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 NOX1Q9Y5S8 564 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 IKBKGQ9Y6K9 419 aa12.44□□□□□ -0.42
LAMB1-203ENST00000393560 A0A0U1RQJ8 604 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 CHL1O00533 1208 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 S100A1P23297 94 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 ALDH5A1P51649 535 aaPredicted RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 HPCAP84074 193 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 TRIM29Q14134 588 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 CCDC82Q8N4S0 544 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 LRRC42Q9Y546 428 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 KCNJ2P63252 427 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 BYSLQ13895 437 aaKnown RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 TBC1D10BQ4KMP7 808 aaPredicted RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 TMTC4Q5T4D3 741 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 SUN5Q8TC36 379 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 ANKRD27Q96NW4 1050 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 HNRNPABQ99729 332 aaKnown RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 GSTA2P09210 222 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 NR1D1P20393 614 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 GALK1P51570 392 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 ODF2Q5BJF6 829 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 C11orf96Q7Z7L8 435 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 C7orf57Q8NEG2 295 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.43□□□□□ -0.424e-7■■■■■ 58.1
LAMB1-203ENST00000393560 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 GBA3Q9H227 469 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms