RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NELFBQ8WX92 580 aa16.77■□□□□ 0.28
MKS1-202ENST00000393119 FGFBP2Q9BYJ0 223 aa16.77■□□□□ 0.28
MKS1-202ENST00000393119 ELP3Q9H9T3 547 aa16.77■□□□□ 0.28
MKS1-202ENST00000393119 LRRC41Q15345 812 aa16.77■□□□□ 0.27
MKS1-202ENST00000393119 NSMFQ6X4W1 530 aa16.77■□□□□ 0.27
MKS1-202ENST00000393119 SV2BQ7L1I2 683 aa16.77■□□□□ 0.27
MKS1-202ENST00000393119 R3HDMLQ9H3Y0 253 aa16.77■□□□□ 0.27
MKS1-202ENST00000393119 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.27
MKS1-202ENST00000393119 VAV3Q9UKW4 847 aa16.77■□□□□ 0.27
MKS1-202ENST00000393119 DICER1Q9UPY3 1922 aaKnown RBP16.76■□□□□ 0.27
MKS1-202ENST00000393119 TEX33O43247 280 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 IDEP14735 1019 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 ITGB5P18084 799 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 EIF2AK2P19525 551 aaKnown RBP16.76■□□□□ 0.27
MKS1-202ENST00000393119 CIITAP33076 1130 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
MKS1-202ENST00000393119 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 DDX12PQ92771 950 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 TRERF1Q96PN7 1200 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 PYM1Q9BRP8 204 aaKnown RBP16.76■□□□□ 0.27
MKS1-202ENST00000393119 WDR11Q9BZH6 1224 aa16.76■□□□□ 0.27
MKS1-202ENST00000393119 TMEM132BQ14DG7 1078 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 KIAA0895Q8NCT3 520 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 SYTL5Q8TDW5 730 aaPredicted RBP16.75■□□□□ 0.27
MKS1-202ENST00000393119 C7orf25Q9BPX7 421 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 RAB34Q9BZG1 259 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 CYP3A4P08684 503 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
MKS1-202ENST00000393119 CDC25BP30305 580 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 EPHX2P34913 555 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 HSD17B4P51659 736 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 USP14P54578 494 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 TPM4P67936 248 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 CTTNQ14247 550 aaKnown RBP16.75■□□□□ 0.27
MKS1-202ENST00000393119 PLS1Q14651 629 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
MKS1-202ENST00000393119 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.75■□□□□ 0.27
MKS1-202ENST00000393119 ADSSL1Q8N142 457 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 DACH1Q9UI36 760 aa16.75■□□□□ 0.27
MKS1-202ENST00000393119 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 TRMT1LQ7Z2T5 733 aaKnown RBP16.74■□□□□ 0.27
MKS1-202ENST00000393119 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 CTDP1Q9Y5B0 961 aaPredicted RBP16.74■□□□□ 0.27
MKS1-202ENST00000393119 IRF6O14896 467 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 ERCC3P19447 782 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 MRPS9P82933 396 aaKnown RBP16.74■□□□□ 0.27
MKS1-202ENST00000393119 PAK1Q13153 545 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.27
MKS1-202ENST00000393119 SNRNP48Q6IEG0 339 aaKnown RBP16.74■□□□□ 0.27
MKS1-202ENST00000393119 ARMCX5Q6P1M9 558 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 GIMAP8Q8ND71 665 aaPredicted RBP16.74■□□□□ 0.27
MKS1-202ENST00000393119 REPS2Q8NFH8 660 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 PIGOQ8TEQ8 1089 aa16.74■□□□□ 0.27
MKS1-202ENST00000393119 WRAP73Q9P2S5 460 aaPredicted RBP16.74■□□□□ 0.27
MKS1-202ENST00000393119 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 ZBED4O75132 1171 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 BAATQ14032 418 aaPredicted RBP16.73■□□□□ 0.27
MKS1-202ENST00000393119 TTLL12Q14166 644 aaPredicted RBP16.73■□□□□ 0.27
MKS1-202ENST00000393119 CEP55Q53EZ4 464 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 DPY19L2Q6NUT2 758 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 MOXD1Q6UVY6 613 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 LRRC8AQ8IWT6 810 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 CDCA5Q96FF9 252 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 TRAF5O00463 557 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 PLA2G4BP0C869 781 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
MKS1-202ENST00000393119 DSG3P32926 999 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 SLFN12Q8IYM2 578 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 EXOC1Q9NV70 894 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 ZNF214Q9UL59 606 aaPredicted RBP16.73■□□□□ 0.27
MKS1-202ENST00000393119 TELO2Q9Y4R8 837 aa16.73■□□□□ 0.27
MKS1-202ENST00000393119 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 SORBS3O60504 671 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 LRCH2Q5VUJ6 765 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 IRF2BP1Q8IU81 584 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 DNAJC19Q96DA6 116 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 EIF2AK1Q9BQI3 630 aaKnown RBP16.72■□□□□ 0.27
MKS1-202ENST00000393119 CUEDC2Q9H467 287 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 PPP2R3BQ9Y5P8 575 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 SPDYE16A6NNV3 312 aaPredicted RBP16.72■□□□□ 0.27
MKS1-202ENST00000393119 PSMD10O75832 226 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 KCNB1Q14721 858 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 COG2Q14746 738 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 TPD52L1Q16890 204 aaPredicted RBP16.72■□□□□ 0.27
MKS1-202ENST00000393119 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 DYDC2Q96IM9 177 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 ZNF577Q9BSK1 485 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 VPS16Q9H269 839 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms