RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 POLR3GO15318 223 aaPredicted RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 SFTPCP11686 197 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 ALAS1P13196 640 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 GRK2P25098 689 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 HADHAP40939 763 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 TMPOP42166 694 aaKnown RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 MRPL12P52815 198 aaKnown RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 PPP1R7Q15435 360 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 BBOF1Q8ND07 529 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 SPDL1Q96EA4 605 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 C16orf45Q96MC5 204 aaPredicted RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 OXCT2Q9BYC2 517 aaPredicted RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 DNAJC18Q9H819 358 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 STRIP2Q9ULQ0 834 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 GAKO14976 1311 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 PPIP5K1Q6PFW1 1433 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 PLCH1Q4KWH8 1693 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 FRMD3A2A2Y4 597 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 GOLGA6L4A6NEF3 574 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 ENPP3O14638 875 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 TTI1O43156 1089 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 MAP3K7O43318 606 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 SEC24DO94855 1032 aaPredicted RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 DDX5P17844 614 aaKnown RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 ATP5OP48047 213 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 SCRN1Q12765 414 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 AIMP1Q12904 312 aaKnown RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 MRPL58Q14197 206 aaKnown RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 KCNB1Q14721 858 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 TMEM164Q5U3C3 297 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 CRTC1Q6UUV9 634 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 CABP7Q86V35 215 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 MFN1Q8IWA4 741 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 TAB3Q8N5C8 712 aaPredicted RBP8.73□□□□□ -1.01
USP48-203ENST00000374732 SPATA18Q8TC71 538 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 GIMAP5Q96F15 307 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 ALS2Q96Q42 1657 aa8.73□□□□□ -1.01
USP48-203ENST00000374732 MAP2P11137 1827 aaKnown RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 POTEFA5A3E0 1075 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 APBA1Q02410 837 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 POTEAQ6S8J7 498 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 EEPD1Q7L9B9 569 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 CDC26Q8NHZ8 85 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 NR1H4Q96RI1 486 aaPredicted RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 CCT7Q99832 543 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 FKBP14Q9NWM8 211 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 ZNF69Q9UC07 566 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 BZW2Q9Y6E2 419 aaKnown RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 TOPAZ1Q8N9V7 1692 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 RNGTTO60942 597 aaKnown RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 PGRP06401 933 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 EVI2BP34910 448 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 HOXD12P35452 270 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 PSMD7P51665 324 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 PFKPQ01813 784 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 LRRC74AQ0VAA2 488 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 ADALQ6DHV7 355 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 DNAJB7Q7Z6W7 309 aaPredicted RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 CCDC110Q8TBZ0 833 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 GMLQ99445 158 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 PARVGQ9HBI0 331 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 MAPK8IP3Q9UPT6 1336 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 ZBTB43O43298 467 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 UBL4AP11441 157 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 PMS2P54278 862 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 MYL6P60660 151 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 MRPS5P82675 430 aaKnown RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 PRKG1Q13976 671 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 MTERF2Q49AM1 385 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 KRT27Q7Z3Y8 459 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 GAS2L3Q86XJ1 694 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 NKAIN3Q8N8D7 197 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 GTF3C6Q969F1 213 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 SMAD5Q99717 465 aaKnown RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 MXD3Q9BW11 206 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 ZSCAN16Q9H4T2 348 aaPredicted RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 KCNQ5Q9NR82 932 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 ARGLU1Q9NWB6 273 aaPredicted RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 ATPIF1Q9UII2 106 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 MYO6Q9UM54 1294 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
USP48-203ENST00000374732 TMED5Q9Y3A6 229 aa8.72□□□□□ -1.01
USP48-203ENST00000374732 TRIM75PA6NK02 468 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 RASSF10A6NK89 507 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 EVI5O60447 810 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 FGFR4P22455 802 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 RXRBP28702 533 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 ETV3P41162 512 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 EXOSC10Q01780 885 aaKnown RBP8.71□□□□□ -1.01
USP48-203ENST00000374732 CACNB2Q08289 660 aaPredicted RBP8.71□□□□□ -1.01
USP48-203ENST00000374732 CWF19L1Q69YN2 538 aaKnown RBP8.71□□□□□ -1.01
USP48-203ENST00000374732 SLC30A9Q6PML9 568 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms