RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 MAGEC3Q8TD91 643 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 TBC1D22AQ8WUA7 517 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 TANGO6Q9C0B7 1094 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 PNPLA7Q6ZV29 1317 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 TNNC1P63316 161 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 ASTE1Q2TB18 679 aaPredicted RBP20.79■□□□□ 0.92
PRPF39-201ENST00000355765 KIF6Q6ZMV9 814 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 AP1M1Q9BXS5 423 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 PACSIN1Q9BY11 444 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 TRIM9Q9C026 710 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 RNF14Q9UBS8 474 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 XIRP1Q702N8 1843 aaKnown RBP20.78■□□□□ 0.92
PRPF39-201ENST00000355765 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
PRPF39-201ENST00000355765 INF2Q27J81 1249 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 PDXDC1Q6P996 788 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 LRIG3Q6UXM1 1119 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 PNMA8AQ86V59 439 aaPredicted RBP20.78■□□□□ 0.92
PRPF39-201ENST00000355765 BLIDQ8IZY5 108 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 USP38Q8NB14 1042 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 KIAA0895Q8NCT3 520 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 L3MBTL1Q9Y468 752 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 KCNK3O14649 394 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 CLTAP09496 248 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 HGSNATQ68CP4 663 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 NSMCE1Q8WV22 266 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 ISCUQ9H1K1 167 aa20.78■□□□□ 0.92
PRPF39-201ENST00000355765 LACTB2Q53H82 288 aaPredicted RBP20.77■□□□□ 0.92
PRPF39-201ENST00000355765 RNF10Q8N5U6 811 aaKnown RBP20.77■□□□□ 0.92
PRPF39-201ENST00000355765 CCDC47Q96A33 483 aaKnown RBP20.77■□□□□ 0.92
PRPF39-201ENST00000355765 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.77■□□□□ 0.92
PRPF39-201ENST00000355765 ABCF2Q9UG63 623 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 C5orf60A6NFR6 353 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 DRD4P21917 467 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 IFFO1Q0D2I5 559 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 KRT71Q3SY84 523 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 FAM47AQ5JRC9 791 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 RSRC1Q96IZ7 334 aaKnown RBP20.77■□□□□ 0.92
PRPF39-201ENST00000355765 ALS2Q96Q42 1657 aa20.77■□□□□ 0.92
PRPF39-201ENST00000355765 F8W031 263 aaPredicted RBP20.76■□□□□ 0.91
PRPF39-201ENST00000355765 SLC5A1P13866 664 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 FGFR2P21802 821 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 MEI1Q5TIA1 1274 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 DNAAF5Q86Y56 855 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 CUL5Q93034 780 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 SLAIN2Q9P270 581 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 CCDC194A0A1B0GVG4 234 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 TRIM28Q13263 835 aaKnown RBP20.76■□□□□ 0.91
PRPF39-201ENST00000355765 PFKFB3Q16875 520 aaPredicted RBP20.76■□□□□ 0.91
PRPF39-201ENST00000355765 RUFY4Q6ZNE9 571 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 CABP7Q86V35 215 aa20.76■□□□□ 0.91
PRPF39-201ENST00000355765 GRID2IPA4D2P6 1211 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 DNAJC8O75937 253 aaPredicted RBP20.75■□□□□ 0.91
PRPF39-201ENST00000355765 GCKP35557 465 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 PEX19P40855 299 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 LRRC45Q96CN5 670 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 DDX47Q9H0S4 455 aaKnown RBP20.75■□□□□ 0.91
PRPF39-201ENST00000355765 BIRC3Q13489 604 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 MAN2A1Q16706 1144 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TBC1D1Q86TI0 1168 aaPredicted RBP20.75■□□□□ 0.91
PRPF39-201ENST00000355765 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 C3orf20Q8ND61 904 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TBC1D5Q92609 795 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TRMT112Q9UI30 125 aaKnown RBP20.75■□□□□ 0.91
PRPF39-201ENST00000355765 CEP104O60308 925 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TLR2O60603 784 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TRIM37O94972 964 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 CLSTN1O94985 981 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 MYBP10242 640 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 DYNLL1P63167 89 aaKnown RBP20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TXNRD1Q16881 649 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 KIAA0753Q2KHM9 967 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 STAG2Q8N3U4 1231 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 TAF4BQ92750 862 aa20.75■□□□□ 0.91
PRPF39-201ENST00000355765 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 ORC4O43929 436 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 CALM1P0DP23 149 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 CALM2P0DP24 149 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 CALM3P0DP25 149 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 NAB2Q15742 525 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 MTMR7Q9Y216 660 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 TNS3Q68CZ2 1445 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 DAPK3O43293 454 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 FAM133BQ5BKY9 247 aaKnown RBP20.74■□□□□ 0.91
PRPF39-201ENST00000355765 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
PRPF39-201ENST00000355765 CCDC63Q8NA47 563 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 SPDL1Q96EA4 605 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 CCSER1Q9C0I3 900 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 KDM4CQ9H3R0 1056 aa20.74■□□□□ 0.91
PRPF39-201ENST00000355765 MAGEB6P1A0A0J9YX57 407 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 CCT8L1PA6NM43 557 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 CTNND1O60716 968 aaKnown RBP20.73■□□□□ 0.91
PRPF39-201ENST00000355765 MYL1P05976 194 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 SLC9C1Q4G0N8 1177 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 KANSL2Q9H9L4 492 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 DDAH1O94760 285 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 BIRC2Q13490 618 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 SLC4A8Q2Y0W8 1093 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 PNMA2Q9UL42 364 aa20.73■□□□□ 0.91
PRPF39-201ENST00000355765 FLT1P17948 1338 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms