RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PKN1Q16512 942 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 CERKLQ49MI3 558 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 WDR59Q6PJI9 974 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 UBR1Q8IWV7 1749 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 NUDCD1Q96RS6 583 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PRMT1Q99873 361 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 SIKE1Q9BRV8 207 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 FAM129AQ9BZQ8 928 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 NEUROG2Q9H2A3 272 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 MLXIPLQ9NP71 852 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 CCDC87Q9NVE4 849 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 NMRK1Q9NWW6 199 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 SUGT1Q9Y2Z0 365 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 EID1Q9Y6B2 187 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ENTPD5O75356 428 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PLEKP08567 350 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PLCG2P16885 1265 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 CCNG1P51959 295 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 MDM2Q00987 491 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 KIF23Q02241 960 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PLS1Q14651 629 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 SCUBE1Q8IWY4 988 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 CD302Q8IX05 232 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ZCRB1Q8TBF4 217 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 MGARPQ8TDB4 240 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ERLEC1Q96DZ1 483 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ZNF317Q96PQ6 595 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 RNPEPL1Q9HAU8 725 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ITM2BQ9Y287 266 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 UBE2Q2LH0YL09 131 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 NAT2P11245 290 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 KLK7P49862 253 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 COPS2P61201 443 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 TTC39AQ5SRH9 613 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 C6orf183Q5T699 404 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 RESP18Q5W5W9 173 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 RNF10Q8N5U6 811 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 TAF4BQ92750 862 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 FAM136AQ96C01 138 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 NMD3Q96D46 503 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ALDH8A1Q9H2A2 487 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PCDH18Q9HCL0 1135 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 VCX3AQ9NNX9 186 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PACSIN2Q9UNF0 486 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 CEMIPQ8WUJ3 1361 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 H0YGN5 161 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 SPTLC1O15269 473 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 BUB1O43683 1085 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 AKR1B10O60218 316 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 ITGA2BP08514 1039 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 FECHP22830 423 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 HDAC4P56524 1084 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 UBXN1Q04323 297 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 SEPT2Q15019 361 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 LRRC14Q15048 493 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 TSNAXIP1Q2TAA8 658 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 ERMARDQ5T6L9 678 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 TMC4Q7Z404 712 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 WDR60Q8WVS4 1066 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 PTPRN2Q92932 1015 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 ETNK1Q9HBU6 452 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 GDF3Q9NR23 364 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 PAG1Q9NWQ8 432 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 FBXL5Q9UKA1 691 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 SH3GLB1Q9Y371 365 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 MYH10P35580 1976 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 SRRM3A6NNA2 597 aaPredicted RBP10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 KRT38O76015 456 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 RXRAP19793 462 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 CALB2P22676 271 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 GBP1P32455 592 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 IL13P35225 146 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 CCR3P51677 355 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 SLC44A4Q53GD3 710 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 SH3D19Q5HYK7 790 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 AZIN2Q96A70 460 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 CCDC51Q96ER9 411 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 TMA7Q9Y2S6 64 aaKnown RBP10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 MED23Q9ULK4 1368 aa10.54□□□□□ -0.72
PTCHD4-201ENST00000339488 TULP4Q9NRJ4 1543 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 TLDC2A0PJX2 215 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 TMEM247A6NEH6 219 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 UNCXA6NJT0 531 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 RAD51CO43502 376 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 TACC1O75410 805 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 SERPINB3P29508 390 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 RTP1P59025 263 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 GSTM4Q03013 218 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms