RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TRIM21P19474 475 aaKnown RBP25.75■■□□□ 1.71
CLPTM1-201ENST00000337392 PABPC4Q13310 644 aaKnown RBP eCLIP25.75■■□□□ 1.711e-8■■■□□ 17.9
CLPTM1-201ENST00000337392 ZBTB9Q96C00 473 aa25.75■■□□□ 1.71
CLPTM1-201ENST00000337392 REXO2Q9Y3B8 237 aaKnown RBP25.75■■□□□ 1.71
CLPTM1-201ENST00000337392 CHMP2AO43633 222 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 TPM1P09493 284 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 PLA2G4BP0C869 781 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 APBA1Q02410 837 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 CXCL9Q07325 125 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 GPBP1Q86WP2 473 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 CATSPER3Q86XQ3 398 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 SUPT20HQ8NEM7 779 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 ETNPPLQ8TBG4 499 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 FAM207AQ9NSI2 230 aaPredicted RBP25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 STAT2P52630 851 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 SPIRE1Q08AE8 756 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 ORC2Q13416 577 aaPredicted RBP25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 CENPPQ6IPU0 288 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 CRYGNQ8WXF5 182 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 PANK4Q9NVE7 773 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 RGL1Q9NZL6 768 aa25.74■■□□□ 1.71
CLPTM1-201ENST00000337392 PLEKP08567 350 aaPredicted RBP25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 CASP5P51878 434 aa25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 ZNF569Q5MCW4 686 aa25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 MSH4O15457 936 aa25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 ARSHQ5FYA8 562 aa25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 LUC7L2Q9Y383 392 aaKnown RBP25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 C10orf71Q711Q0 1435 aa25.73■■□□□ 1.71
CLPTM1-201ENST00000337392 WNT10BO00744 389 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 POLD1P28340 1107 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 IKZF4Q9H2S9 585 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 BICDL2A1A5D9 508 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 EML1O00423 815 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 SPDYE2Q495Y8 402 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 FAM151AQ8WW52 585 aa25.72■■□□□ 1.71
CLPTM1-201ENST00000337392 NPM3O75607 178 aaKnown RBP25.71■■□□□ 1.71
CLPTM1-201ENST00000337392 RSPH10B2B2RC85 870 aa25.71■■□□□ 1.71
CLPTM1-201ENST00000337392 RSPH10BP0C881 870 aa25.71■■□□□ 1.71
CLPTM1-201ENST00000337392 GCFC2P16383 781 aaKnown RBP25.71■■□□□ 1.71
CLPTM1-201ENST00000337392 EHHADHQ08426 723 aa25.71■■□□□ 1.71
CLPTM1-201ENST00000337392 SLC35F6Q8N357 371 aa25.71■■□□□ 1.71
CLPTM1-201ENST00000337392 SFI1A8K8P3 1242 aa25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 ZNF76P36508 570 aa25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 ARHGAP29Q52LW3 1261 aa25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 HERC4Q5GLZ8 1057 aaPredicted RBP25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 RTKN2Q8IZC4 609 aa25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 SMCR8Q8TEV9 937 aaPredicted RBP25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 PKD2L1Q9P0L9 805 aa25.7■■□□□ 1.71
CLPTM1-201ENST00000337392 SPATA31C1P0DKV0 1188 aa25.7■■□□□ 1.7
CLPTM1-201ENST00000337392 CYP11B2P19099 503 aa25.7■■□□□ 1.7
CLPTM1-201ENST00000337392 USP11P51784 963 aa25.7■■□□□ 1.7
CLPTM1-201ENST00000337392 CYP26C1Q6V0L0 522 aa25.7■■□□□ 1.7
CLPTM1-201ENST00000337392 PIGOQ8TEQ8 1089 aa25.7■■□□□ 1.7
CLPTM1-201ENST00000337392 WDR18Q9BV38 432 aa25.7■■□□□ 1.7
CLPTM1-201ENST00000337392 ARHGAP25P42331 645 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 DNM2P50570 870 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 CYP27A1Q02318 531 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 CCDC94Q9BW85 323 aaPredicted RBP25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 NAA15Q9BXJ9 866 aaKnown RBP25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 TTYH3Q9C0H2 523 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 HERC5Q9UII4 1024 aaKnown RBP25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 HDAC9Q9UKV0 1011 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 GUCA1BQ9UMX6 200 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 TMX2Q9Y320 296 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 PVALEFA0A1B0GWK0 134 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 FAM26FQ5R3K3 315 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 LRRC55Q6ZSA7 311 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 NIM1KQ8IY84 436 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 MNS1Q8NEH6 495 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 OR8K1Q8NGG5 319 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 PSMD1Q99460 953 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 ARHGEF10LQ9HCE6 1279 aa25.69■■□□□ 1.7
CLPTM1-201ENST00000337392 KRT18P05783 430 aaKnown RBP25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 PRAMEF18Q5VWM3 479 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 KRT26Q7Z3Y9 468 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 TMTC1Q8IUR5 882 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 PUF60Q9UHX1 559 aaKnown RBP25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 DUSP10Q9Y6W6 482 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 RCCD1A6NED2 376 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 NDUFA10O95299 355 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 SREBF1P36956 1147 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 CTTNQ14247 550 aaKnown RBP25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 AGBL1Q96MI9 1066 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 CRACR2AQ9BSW2 395 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 TANGO6Q9C0B7 1094 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 ZNRF3Q9ULT6 936 aa25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 EPN1Q9Y6I3 576 aaPredicted RBP25.68■■□□□ 1.7
CLPTM1-201ENST00000337392 TRAF5O00463 557 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 TRMT1LQ7Z2T5 733 aaKnown RBP25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 GUF1Q8N442 669 aaKnown RBP25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 MMRN2Q9H8L6 949 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 CAPN11Q9UMQ6 739 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 CYP3A7-CYP3A51PA0A087WV96 503 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 ENC1O14682 589 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 CYP3A7P24462 503 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 AP3B2Q13367 1082 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 NDST4Q9H3R1 872 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 MRFAP1Q9Y605 127 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 FECHP22830 423 aa25.67■■□□□ 1.7
CLPTM1-201ENST00000337392 SLC12A3P55017 1021 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms